Pairwise Alignments

Query, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

Subject, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

 Score =  114 bits (284), Expect = 4e-30
 Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 10/291 (3%)

Query: 5   RTLLSLLGLASLALSGTSAGA---AEPLTLTVGDQFFSNRIVLELSGELK----DLPYKI 57
           RT+    GL +L  +  S GA   A+  +L +G Q +   ++L+  G L+    +   ++
Sbjct: 2   RTVFLRRGLVALFAAAVSFGAITQAQAESLRIGYQKYGTLVLLKAKGTLEKRLAEQGVQV 61

Query: 58  DFKRFNTGSPVASAVASGALDVGIVGDTPVISLAANGAPVKVVASTQTSLDGVGIVARKG 117
            +  F  G  +   +  G++D G+ G+TP +   A GA +  VA    +     I+  KG
Sbjct: 62  QWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPHSEAILVPKG 121

Query: 118 --IHSVADLRGKTVAIWNGSWSQQLAYKALDEAGVPRSSVNFKYLLPAEASLALTQGDID 175
             I SV DL+GK V +  GS    L  +AL++AG+  S +   YL PA+A  A  +G +D
Sbjct: 122 SPIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGSVD 181

Query: 176 AFGTWEPYVSLQEKE-GSTLIRNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRARQ 234
           A+  W+PY +  E++  +  +R+ KGL+    + +A      Q  A+I   I  +    +
Sbjct: 182 AWVIWDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAVGE 241

Query: 235 WSNTHVDEYAEAWSKANQSAPEIAKVWFKRDAIKVLPISPTIISEAQATAD 285
           WS  +  E  +  +        I     KR      P++P +++  Q  AD
Sbjct: 242 WSQANPQEVTDQVAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKIAD 292