Pairwise Alignments

Query, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

Subject, 319 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  111 bits (277), Expect = 3e-29
 Identities = 85/298 (28%), Positives = 141/298 (47%), Gaps = 9/298 (3%)

Query: 11  LGLASLALSGTSAGAAE--PLTLTVGDQFFSNRIVLELSGELKDLPY---KIDFKRFNTG 65
           L LA L    T A AAE  P  L +G Q  S  +VL  S +L +  Y   KI +  F  G
Sbjct: 7   LALAGLLSVSTFAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPESKISWVEFPAG 66

Query: 66  SPVASAVASGALDVGIVGDTPVISLAANGAPVKVVA--STQTSLDGVGIVARKGIHSVAD 123
             +  A+  G++D+G  GD P I   A GA +  V     +   + + +     I +VAD
Sbjct: 67  PQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVAD 126

Query: 124 LRGKTVAIWNGSWSQQLAYKALDEAGVPRSSVNFKYLLPAEASLALTQGDIDAFGTWEPY 183
           L+G  VA   GS S  L  +AL +AG+  + +   YL PA+A  A  QG++DA+  W+PY
Sbjct: 127 LKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPY 186

Query: 184 VSLQEKEGST-LIRNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRARQWSNTHVDE 242
            S    +G   ++++   L    ++ +A  P   +  A I+  +A  + A   + +  ++
Sbjct: 187 YSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQ 246

Query: 243 YAEAWSKA-NQSAPEIAKVWFKRDAIKVLPISPTIISEAQATADFLVDAQMLKQRYDV 299
                +K     AP IA     R    + P++  + +  Q TAD   + +++ ++ D+
Sbjct: 247 SIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDI 304