Pairwise Alignments

Query, 685 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  236 bits (601), Expect = 3e-66
 Identities = 205/695 (29%), Positives = 315/695 (45%), Gaps = 30/695 (4%)

Query: 1   MHSLLSPGIRLLGRFGFARKFQILFFLFMLP-LAGSLWMIGSDYRDKLTVISSEQSGVR- 58
           M SLL P + L+ R  F  KF ++  LF+LP LA + +++   +R        E  G R 
Sbjct: 1   MKSLLYPAVALMNRLSFGMKFSLVSVLFLLPMLATNYYLVRDSWR--------EYQGTRV 52

Query: 59  QLLALDALDGQLTAQRNLAARWKAADILHAPTPAAKAA--MDKVDANFPVILQSLQALGD 116
           +L +LD L   L  +R+L        I      + KA     K+ A    +L  LQ+L  
Sbjct: 53  ELQSLDLLGSSLALRRDLETLNNQVQINATLGQSGKAGDLEGKISALEQSVLSRLQSLNA 112

Query: 117 SLKAQNASADIQARFDALQATVKGMDSQSLRTVGWWPDGYDRFTSALTAMQILREQITLD 176
                   A   A+ D L A  K    ++         G       L   Q+L + I   
Sbjct: 113 MATEPEQIAAFDAKRDELIAAFKAQQQETSLLSKSALIG-----KLLNKAQMLSQIIASQ 167

Query: 177 AGLILDPWLETYLLMQISTQYTPDLIERIGRMASVGQASIASGQFTLQSRLQMRDLRSRI 236
           AGL  D   +   L ++ T  TP + + +G   ++G  S+  G     S  +  +L  ++
Sbjct: 168 AGLSRDSQSDLRQLSELITSVTPLVTQTLGEGRAMGAYSLGQGFLNSSSSTRFDELLQQL 227

Query: 237 GDARDQ----LVKAAASLKAKQYAGIEPWTAQYDNSLQRLDSELKVLDDGVFGGTIKLDT 292
              + +    L  A  S KA  +A ++   A+  N+  +  SEL   +  V   T+    
Sbjct: 228 EKIQAEYGLKLQDALGSSKAA-HAALDG-LAKSSNASLKQGSEL-FEEQVVMAETLDAPW 284

Query: 293 AAFDTSVDGMLDSLGALRNQSLASLDARLGHYRDRSLQKFVPVAATFSLLALAALYLFMC 352
             F   V  ++     L + +L  L  +L     ++    V + +  S + L   YL+  
Sbjct: 285 QDFYDGVSRLMAQTYQLDDATLTFLGQQLEQRLAQNRTHMVVLVSALSAVFLLIFYLYAG 344

Query: 353 LQASIRRSASGITTLAESLRDGNLCVEVAVEGRDELAAISTALNVAVVQLRTSLLGVNHE 412
             AS R +   +  + + +  G++ V    + RDEL  +    N  V ++   +  V H 
Sbjct: 345 FYASTRTTLRRLGAMMDKVAAGDMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHT 404

Query: 413 TQQL---GSAVLTLNAQSGNTLTEVEDQQQQISQIATAATQLAATSLGVARSCEHASDSA 469
             Q+      V T++AQS      V  Q+ QI Q+ATA  Q+++T+  VARS   A  SA
Sbjct: 405 VSQVELQAGQVETVSAQSNQA---VSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSA 461

Query: 470 QQTRRIAEDSSRDSQRTTASIQQLNVRLTDTADALEQVSQQGQQIQSVVDTIRGIAEQTN 529
                         Q    SI +L   +  +   + Q++   Q I SV++ I+ IAEQTN
Sbjct: 462 HSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTN 521

Query: 530 LLALNAAIEAARAGEQGRGFAVVADEVRSLSQRTQASTAQIAGTVDSLRATVSQAVALMG 589
           LLALNAAIEAARAGEQGRGFAVVADEVR+L++RTQ ST +I   +  L++ V+ AV  MG
Sbjct: 522 LLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMG 581

Query: 590 AACEQALTDAQSVTGLGTRLGEIAGAVQHVTDTLAQIATAVEEQAATADEVSGNIQQVDQ 649
           ++ + A         +   L  I GAV  + D   QIA AVE+Q A A ++  NI ++++
Sbjct: 582 SSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINR 641

Query: 650 AAGRLLDGARAVNQAADTLSKGSQALSDNTARFRL 684
           A     +GA     A+  LS     L      FR+
Sbjct: 642 AGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676