Pairwise Alignments

Query, 287 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 312 a.a., DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) from Escherichia coli BW25113

 Score =  112 bits (280), Expect = 1e-29
 Identities = 76/271 (28%), Positives = 138/271 (50%), Gaps = 1/271 (0%)

Query: 2   PSSDLQIDWLKCFVAVVDAGSLSGAAHEVNRSQSAVSMQMKKLEAALGRPLLNRGPRHLQ 61
           P  +L +D L+ FVAV D  + + AA  V R+QSAVS QM++LE  +G+ L  R  R+  
Sbjct: 7   PIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKL 66

Query: 62  LTDDGQTLLGFARRMLALHAETQAAFHGEALTGRIRLGVAEDYAAKYLTPVLKRFAPRYA 121
           LT+ G  LLG+AR++L  + E  ++     L G + +G +++ A   L  +L R +  Y 
Sbjct: 67  LTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYP 126

Query: 122 GVDIELTCEQSTALIPRVRSGDLDLALVS-RDSPHSGTFLFKEPMVWVGSPQFELWRRDP 180
            + +++  +++  +   + S ++DL + + R S      L   P  W  + ++ L + +P
Sbjct: 127 KLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEP 186

Query: 181 VPIAVYESASLARRYAVNSLAQQGRQFKVVYNSSSLAGQVAAVEGGLAIAAITQCTVQPS 240
           +P+ + +  S  R   + +L +    +++ Y +S+L    AAV+ GL + A     + P 
Sbjct: 187 IPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD 246

Query: 241 LQVLGSEHGLGNIEPMEVSILRSRASRGSKA 271
           L+VL    GL  +   E  +    +S    A
Sbjct: 247 LRVLSGVDGLPPLPDTEYLLCYDPSSNNELA 277