Pairwise Alignments

Query, 334 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 345 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  182 bits (462), Expect = 1e-50
 Identities = 118/292 (40%), Positives = 162/292 (55%), Gaps = 17/292 (5%)

Query: 51  EGVVWNYRLTRALVAAACGAGLATCGVILQSLLRNPLADPYLLGISAGASTGAVLVALIG 110
           E ++   RL R L+  A G  LA  GV +Q L RNPLADP L+G+S+GA+ GA  VA++G
Sbjct: 59  ELILGQIRLPRTLLGLAVGGVLALSGVAMQGLFRNPLADPGLVGVSSGAALGAA-VAIVG 117

Query: 111 ---VGG-----GLISLSAGAFVGAMAAFALVILLARASGSASGTGQIILAGIAGSQLFNA 162
               GG     G   LS  AF+G +   ALV  L R +G  +    ++LAGIA + L ++
Sbjct: 118 GSFFGGLPDAFGPYLLSFCAFLGGLGVTALVYRLGRRNGQTN-VATMLLAGIALTALASS 176

Query: 163 LTAFLITKSASSEQARGILFWLLGNLSGVRWPSVWLAVPVAVAGLAVCLW---HRRALDA 219
               L T  A     R + FW LG+L+G  +  +W   P+ +    V +W     +AL+A
Sbjct: 177 AVG-LFTYLADDATLRTLTFWNLGSLNGASYSRLW---PLLLVSAGVAMWLPRRAKALNA 232

Query: 220 FTFGSDSAASLGIPVRRVQFVLVGCAALVTAVMVSIVGSIGFVGLVIPHAVRLLLGTGHS 279
              G   A  LGI V  ++  LV C AL     V+  G IGFVGLV+PH VRLL G  H 
Sbjct: 233 LLLGESEANHLGIDVEGLKRELVFCTALGVGAAVAAAGMIGFVGLVVPHLVRLLAGPDHR 292

Query: 280 RLLPASALGGALFLIAADVLSRTLIKGQVIPVGVVTALVGAPVFALILIGRR 331
            LLPAS L GA  L+ AD+++R  +    +P+G+VTA +GAP F  +L+  R
Sbjct: 293 VLLPASVLAGASLLLFADLVARLALAPAELPIGIVTAFIGAPFFLYLLLRGR 344