Pairwise Alignments

Query, 334 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 323 a.a., Vitamin B12 ABC transporter, permease protein BtuC from Sphingobium sp. HT1-2

 Score =  182 bits (463), Expect = 8e-51
 Identities = 122/325 (37%), Positives = 174/325 (53%), Gaps = 11/325 (3%)

Query: 8   LALLLAALLAGVAIGETAISPQVVLQVLANKLWAASYVLDPIDEGVVWNYRLTRALVAAA 67
           +ALLL A +A VA+G   I+P  +L VLA          D +   +V + RL R  +   
Sbjct: 6   IALLLVAGIASVALGSVTIAPARILSVLAGGG-------DMVARAIVIDLRLPRMAIGLL 58

Query: 68  CGAGLATCGVILQSLLRNPLADPYLLGISAGASTGAVLVALIGVGG-GLISLSAGAFVGA 126
            GA L   G  LQ  LRNPLA+P +LG+S  A+ GAV+    G+     ++L   A V A
Sbjct: 59  VGAMLGLSGAALQGYLRNPLAEPAVLGVSNAAALGAVIALYFGLSELHPMALPLLAIVTA 118

Query: 127 MAAFALVILLARASGSASGTGQIILAGIAGSQLFNALTAFLITKSASSEQARGILFWLLG 186
           +AA   + LLA   G +     +ILAGIA + L  A  +  +  S +   A  I+ WL+G
Sbjct: 119 LAAIGALFLLA---GPSESPLTLILAGIAVATLAGAGISLALNLSPNPFAAMEIMSWLMG 175

Query: 187 NLSGVRWPSVWLAVPVAVAGLAVCLWHRRALDAFTFGSDSAASLGIPVRRVQFVLVGCAA 246
           +L       + LA+P    G A+ L+  RALDA T G D A +LG+ + R +  L+   A
Sbjct: 176 SLENRSIDHLLLALPCIAVGAALLLYDGRALDALTLGEDGARALGVDLSRARLRLMAGVA 235

Query: 247 LVTAVMVSIVGSIGFVGLVIPHAVRLLLGTGHSRLLPASALGGALFLIAADVLSRTLIKG 306
           +     V++ GSIGFVGL++PH VR L     S LL  S LGGA+ L  AD+  R +   
Sbjct: 236 IGVGGAVAVTGSIGFVGLIVPHLVRPLTDRSPSALLLPSMLGGAVLLTLADIGVRIIPTS 295

Query: 307 QVIPVGVVTALVGAPVFALILIGRR 331
             + +GV+TA++G PVF + L+  R
Sbjct: 296 SELKLGVLTAILGVPVFLIHLMRER 320