Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Pseudomonas simiae WCS417

Subject, 897 a.a., UvrABC system protein B from Xanthobacter sp. DMC5

 Score =  800 bits (2067), Expect = 0.0
 Identities = 406/669 (60%), Positives = 511/669 (76%), Gaps = 11/669 (1%)

Query: 4   FQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTLVLA 63
           F + + F+PAGDQP+AI+++    EAG   Q LLGVTGSGKTF++A VI ++ RP +VLA
Sbjct: 100 FTMKSDFQPAGDQPQAIKELCAQAEAGDRDQVLLGVTGSGKTFTMAKVIEKLQRPAIVLA 159

Query: 64  PNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRL 123
           PNKTLAAQLYGEFK+FFP+NAVEYFVSYYDYYQPEAYVP +DT+IEK++SIN+ I++MR 
Sbjct: 160 PNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRH 219

Query: 124 SATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQYTRN 183
           +AT++LLER D IIV +VSCIYG+GS ETY  M   +  G+++DQR L+  L +LQY R 
Sbjct: 220 AATRSLLERDDVIIVASVSCIYGIGSVETYSAMTFDIKVGERIDQRGLIADLVALQYKRI 279

Query: 184 DMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFTFY 243
             DFAR TFRVRGD ++I+PA  +  A R+ LF DEVES++ FDPLTG+    +     Y
Sbjct: 280 QSDFARGTFRVRGDSVEIFPAHYEDRAWRVSLFGDEVESIAEFDPLTGQKSGDMKSVRVY 339

Query: 244 PKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYCN 303
             SHYVTPR TL+ AI GIK EL  RL+ L    +L+EAQRLEQRTR+DLEM+   G C 
Sbjct: 340 AASHYVTPRPTLIQAISGIKAELKMRLDELYKMGRLLEAQRLEQRTRYDLEMMEATGSCA 399

Query: 304 GIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVEY 363
           GIENYSR+L+GR+ G PPPTL++Y+P +AL+ IDESHV+VPQ+GAMY+GD  RK TL EY
Sbjct: 400 GIENYSRWLTGRKPGEPPPTLFEYVPDNALVFIDESHVTVPQIGAMYRGDFRRKATLAEY 459

Query: 364 GFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRV-IEQLVRPTGLVDPEIE 422
           GFRLPS +DNRP+RF+EWEA+ PQT+ VSATPG++E    G V +EQ++RPTGL+DP +E
Sbjct: 460 GFRLPSCMDNRPLRFEEWEAMRPQTVHVSATPGSWEMNQTGGVFVEQVIRPTGLIDPPVE 519

Query: 423 IRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDTVE 482
           +RPA TQVDDLL E+    A   R LVT LTKRM+EDLT+YL ++G+RVRY+HSDIDT+E
Sbjct: 520 VRPARTQVDDLLGEVRAVAAKGYRTLVTVLTKRMAEDLTEYLHENGIRVRYMHSDIDTIE 579

Query: 483 RVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 542
           R+EIIRDLRLG FDVL+GINLLREGLD+PE  LVAILDADKEGFLRSE SL+QTIGRAAR
Sbjct: 580 RIEIIRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQTIGRAAR 639

Query: 543 NLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATVPG 602
           N++GR +LYAD ITGSMERA+ ET RRR+KQ+A+N E+GITP+ V K + DI+       
Sbjct: 640 NVDGRVVLYADHITGSMERAMAETSRRREKQVAYNTEHGITPESVKKAIGDILNSV---- 695

Query: 603 SRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDEIG 662
                 +  A  AEE A + + L++       +  LE++M   A DL+FE AA+ RDEI 
Sbjct: 696 YERDHVQVDAGLAEEGAAFGHNLKAV------MADLEKRMRAAAADLDFETAARLRDEIR 749

Query: 663 KLRERLLAV 671
           +L    LAV
Sbjct: 750 RLEATELAV 758