Pairwise Alignments

Query, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  418 bits (1075), Expect = e-120
 Identities = 275/728 (37%), Positives = 396/728 (54%), Gaps = 38/728 (5%)

Query: 379  LYRDEQGAPLRMAGTLLDITDQVEREQRLTASEEKFASLFQVSPDPICVTCLDGGTFIE- 437
            L RD+     R+ G   DITDQ+E  + L  SE+++  L +   D IC T  D    +  
Sbjct: 554  LARDKTTQISRIIGVAKDITDQIEASESLRDSEQRYRMLAESISDVICST--DSQLALNY 611

Query: 438  INPAFTQTFGWTAAEVIDKSAEQI-----------GLWDESSKRLQRIERV--IREQALS 484
            I+P+     G+    V     + I            L +E S+ L   E +  +R++  +
Sbjct: 612  ISPSVNAVLGYDVDWVFKNGWQSIIANPQQLTGIYSLMEEVSRALGDPEALNKLRDEIQT 671

Query: 485  NVAIV-AHHKNGQALTCVISSRLIKVGDQ----PCIVTTLRDITQQQRSEAALKASEEKF 539
             + +      +G+ +   I  R++ V D+      I+   RDI+QQ+R+E  L+ +    
Sbjct: 672  QLFLFDCLRADGRKVP--IELRMVLVWDEHGAFEGILGVGRDISQQRRAEKDLRMA---- 725

Query: 540  AKAFHSSPDAISITERDTGRYVEVNDGFCRLTGYRAEEAIGLTLYQIGIWADENQRAALL 599
            A  F  S  AI IT+   G  V+ N+ F R++GY   + +      + +  DE Q A L 
Sbjct: 726  ATVFEHSTSAILITD-PAGYIVQANEAFSRVSGYAVSDVLDQLPNMLTV--DEQQEAHLR 782

Query: 600  AEL-QIKGRINYLEMLWHNKR-GELLAVEVSVEPITLNETPCLLLTA--RDVSLLKNAQA 655
              L Q+     +   +W  +R GE     V +  +  +E           D+S  K ++ 
Sbjct: 783  YVLKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVFDDEGDLASYVCFFSDISERKASEQ 842

Query: 656  QIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVG 715
            +I  LAY+D LT+LPNR L  DRL   +   +R      L+FLDLD FK INDSLGH  G
Sbjct: 843  RIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKPINDSLGHAAG 902

Query: 716  DTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQELADTLRELLSE 775
            D +LK +  RL   V  +DTVAR+GGDEF +LL      R    N+   +A+ +   L +
Sbjct: 903  DRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPRVN-REMALNRAIHVAEQILASLVK 961

Query: 776  PMFLDGHRLQVTPSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNTTQMFHNSMQKTA 835
            P  L+G    VT SIG+AL P  G+  + L+K AD A+Y AK+ G+N  Q +   M  +A
Sbjct: 962  PFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASA 1021

Query: 836  SERLRMETDLRLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQLGAQSPSEFIKVL 895
             ERL +E+DLR AL + EF ++YQPQ    G R+ GAEAL+RW+HP+ G   P +FI VL
Sbjct: 1022 LERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVL 1081

Query: 896  EDSGLILEVGTWILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQNDFVERVERSLK 955
            E+ GL+++VG W++ EAC   +      +  P    + VNIS RQF       R+   LK
Sbjct: 1082 EELGLVVDVGDWVISEACRQLKTWHQNKVRVP---KVSVNISARQFSDGQLGTRIATILK 1138

Query: 956  QHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVD 1015
               LP + L+LE+TE I+++ +++ +  +  LK LG+S A+DDFGTGYSSL YLK+ P+D
Sbjct: 1139 DTGLPPACLELELTESILMREVNEAMQILDSLKNLGLSIAVDDFGTGYSSLNYLKQFPID 1198

Query: 1016 ALKIDQSFVRDATHDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLAFLQGLGCHLYQG 1075
             LKID++FV        DA+I RAI+AMA SLNL VIAEGVET +QL FL+  GC   QG
Sbjct: 1199 VLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQG 1258

Query: 1076 YLHSRPLP 1083
            YL  RP+P
Sbjct: 1259 YLFGRPMP 1266



 Score = 43.9 bits (102), Expect = 8e-08
 Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 7/165 (4%)

Query: 367 DGSSRYLESRARLYRDEQGAPLRMAGTLLDITDQVEREQRLTASEEKFASLFQVSPDPIC 426
           DG    +E R  L  DE GA   + G   DI+ Q   E+ L  +    A++F+ S   I 
Sbjct: 682 DGRKVPIELRMVLVWDEHGAFEGILGVGRDISQQRRAEKDLRMA----ATVFEHSTSAIL 737

Query: 427 VTCLDGGTFIEINPAFTQTFGWTAAEVIDKSAEQIGLWDESSKRLQRIERVIREQALSNV 486
           +T    G  ++ N AF++  G+  ++V+D+    + + ++    L+ + + + + +    
Sbjct: 738 ITD-PAGYIVQANEAFSRVSGYAVSDVLDQLPNMLTVDEQQEAHLRYVLKQLHQHSTWEG 796

Query: 487 AIVAHHKNGQALTCVISSRLI--KVGDQPCIVTTLRDITQQQRSE 529
            +    +NG+     +    +    GD    V    DI++++ SE
Sbjct: 797 EVWLKRRNGEHYPAWVGITAVFDDEGDLASYVCFFSDISERKASE 841



 Score = 33.5 bits (75), Expect = 1e-04
 Identities = 51/216 (23%), Positives = 86/216 (39%), Gaps = 27/216 (12%)

Query: 357 YQLTYRVPMED--GSSRYLESRARLYRDEQGAPLRMAGTLLDITDQVER---EQRLTASE 411
           +QL   + ++D  G+ +YL    RL   EQ  P      +L I+D   R   E  L   E
Sbjct: 398 HQLELEIQLKDVAGNEQYLWLVMRL--PEQ--PDDFKAVILSISDITSRKLIELSLVERE 453

Query: 412 EKFASLFQVSPDPICVTCLDGGTFIEINPAFTQTFGWTAAEVIDKSAEQIG--LWD---- 465
             ++ + +  PD + V  +     I  N     T G+  AE+     +Q+G   W+    
Sbjct: 454 SFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGHTLGYNKAEL-----QQMGEYFWEILLH 508

Query: 466 ----ESSKRLQRIERVIREQALSNVAIVAHHKNGQALTCVISSRLI---KVGDQPCIVTT 518
               E    L++ +R I         +   H+N Q     I  + +   K      I+  
Sbjct: 509 PEDAEHYHDLRQQQRQIGYTTQLQCQLRFRHRNNQWRRFDIREQALARDKTTQISRIIGV 568

Query: 519 LRDITQQQRSEAALKASEEKFAKAFHSSPDAISITE 554
            +DIT Q  +  +L+ SE+++     S  D I  T+
Sbjct: 569 AKDITDQIEASESLRDSEQRYRMLAESISDVICSTD 604



 Score = 28.5 bits (62), Expect = 0.003
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 125 SLAPDKAGR-RRMIGVIREITHQRDRENALSHSEKRFATLFHLCPNMVLLT 174
           +LA DK  +  R+IGV ++IT Q +   +L  SE+R+  L     +++  T
Sbjct: 553 ALARDKTTQISRIIGVAKDITDQIEASESLRDSEQRYRMLAESISDVICST 603