Pairwise Alignments
Query, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417
Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440
Score = 419 bits (1077), Expect = e-121
Identities = 302/898 (33%), Positives = 459/898 (51%), Gaps = 51/898 (5%)
Query: 218 QLVKATQRKGEPITMEVQFCASNG-QIHDGTLSAQKVELEGEAYLISTFLDTTERKNAEQ 276
QL+ A + + +EV+ G ++H ++ ++ +I + D T RK E
Sbjct: 381 QLIDALIEQRPLLELEVRLPTPQGTELHLWLMARLPLQRRDYQAVILSISDITSRKQVEL 440
Query: 277 ALKDSQERLDLALDSAQLGTWDWHIPTG-MLYGSARAAQLHGLPPEPFHESFDAFFEGM- 334
+L + + + + + +P+ M++ + Q G + D F+E +
Sbjct: 441 SLLERESFWSDVVRTVPDQLYVQDVPSQRMIFSNRHLGQTLGYDRTELAQMGDRFWELLL 500
Query: 335 -PDDER--ESMRNAYRTLREGPAGNYQLTYRVPMEDGSSRYLESRAR-LYRDEQGAPLRM 390
P+D +++R R + QL +R DGS R + R + L R+ +G R+
Sbjct: 501 HPEDAAHYQALRRQQRDNCHDQPLHCQLRFR--HRDGSWRCYDIREQVLTRNAEGLVTRI 558
Query: 391 AGTLLDITDQVEREQRLTASEEKFASLFQVSPDPICVTCLDGGTFIE-INPAFTQTFGWT 449
G D+T Q+E Q L SE+++ L + D I T D + ++P+ G+
Sbjct: 559 IGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFST--DNQLKLNYVSPSVQSVLGYQ 616
Query: 450 A--------AEVIDKSAEQIGLWDESSKRLQRIERVIREQA--------LSNVAIVAHHK 493
A ++ A+ G++ ++R+ + + + A L +
Sbjct: 617 ADWIFANGWQSIVANPAQLTGIYS----LMERVSKAMGDPAQMAQLCSQLPTQLFLFDCL 672
Query: 494 NGQALTCVISSRLIKVGDQPC----IVTTLRDITQQQRSEAALKASEEKFAKAFHSSPDA 549
I RL+ V D ++ RDI+QQ+R+E L+ + A F S A
Sbjct: 673 RADGRKIPIELRLVLVWDDDQRFEGVLGVGRDISQQRRAEKDLRMA----ATVFEHSTSA 728
Query: 550 ISITERDTGRYVEVNDGFCRLTGYRAEEAIGLTLYQIGIWADENQRAALLAEL-QIKGRI 608
I IT+ G V+ N+ F R++GY E + + + DE Q L + Q+ R
Sbjct: 729 ILITD-PAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTV--DEQQEGHLRYVVKQLHQRG 785
Query: 609 NYLEMLWHNKR-GELLAVEVSVEPITLNETPCLLLTA--RDVSLLKNAQAQIRHLAYHDP 665
++ +W +R G+ V + + +E D+S K ++ +I LAY+D
Sbjct: 786 SWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRIHRLAYYDA 845
Query: 666 LTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIVTAR 725
LT+LPNR L DRL + +R L+FLDLD FK INDSLGH GD +LK + R
Sbjct: 846 LTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMALR 905
Query: 726 LEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQELADTLRELLSEPMFLDGHRLQ 785
L A V +DTVAR+GGDEF +LL TR N+ +A+ + L P L+
Sbjct: 906 LLACVDDDDTVARMGGDEFTLLLQPRP-TREMALNRAIHVAENILGSLVRPFVLENREFF 964
Query: 786 VTPSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNTTQMFHNSMQKTASERLRMETDL 845
VT SIG+AL P GS + L+K AD A+Y AK+ G+N Q + M +A ERL +E+DL
Sbjct: 965 VTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLELESDL 1024
Query: 846 RLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQLGAQSPSEFIKVLEDSGLILEVG 905
R A+ + EF ++YQPQ G R+ GAEAL+RW+HP G P +FI V+E+ GL+++VG
Sbjct: 1025 RHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVG 1084
Query: 906 TWILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQNDFVERVERSLKQHKLPFSLLK 965
W+L EA +QL A + VNIS RQF R+ L++ LP + L+
Sbjct: 1085 DWVLREAS---RQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPACLE 1141
Query: 966 LEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVR 1025
LE+TE I+++ +++ + + LK LG+S A+DDFGTGYSSL YLK+ P+D LKID++FV
Sbjct: 1142 LELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVD 1201
Query: 1026 DATHDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLAFLQGLGCHLYQGYLHSRPLP 1083
DA+I RAI+AMA SLNL VIAEGVET +QL FL+ GC QGYL RP+P
Sbjct: 1202 GLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMP 1259
Score = 28.9 bits (63), Expect = 0.003
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 80 LLAPEDSARVVRAFHAVLAGEPFEQAMHHHIQWP--DGSLHWLEINGSLAPDKAGR--RR 135
LL PED+A +A +Q +H +++ DGS +I + A R
Sbjct: 499 LLHPEDAAHY-QALRRQQRDNCHDQPLHCQLRFRHRDGSWRCYDIREQVLTRNAEGLVTR 557
Query: 136 MIGVIREITHQRDRENALSHSEKRFATLFHLCPNMVLLT 174
+IGV +++T Q + +L SE+R+ L +++ T
Sbjct: 558 IIGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFST 596