Pairwise Alignments

Query, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  469 bits (1206), Expect = e-136
 Identities = 311/956 (32%), Positives = 489/956 (51%), Gaps = 43/956 (4%)

Query: 142  EITHQRDRENALSHSEKRFATLFHLCPNMVLLTRQADGLISEANQYFEMLFGWPLADAIG 201
            EI+ +   E  L  SE  +  L      +       D   S  + + E L G+PL+D   
Sbjct: 295  EISRRIALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSD--- 351

Query: 202  RTTLDLGLWR---HPEQRA---QLVKATQRKGEPITMEVQFCASNGQIHDGTLSAQKVEL 255
               L  G WR   HPE          +    G   +++ +   ++GQ          +E 
Sbjct: 352  --WLRPGFWRSILHPEDALWAQAYCDSETAAGRDHSLDYRVIRADGQPLWVRNIVSMIEH 409

Query: 256  EGEAYLISTFLDTTERKNAEQALKDSQERLDLALDSA-QLGTWDWHIPTGMLYGSARAAQ 314
              +  +    +D +E K  E AL+ S+++          +     H    +L  +    +
Sbjct: 410  GHQPVMRGLMIDISETKRTEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEE 469

Query: 315  LHGLPPEPF--HESFDAFFEGMPDDERESMRNAYRTLREGPAGNYQLTYRVPMEDGSSRY 372
              GLPP+      + D    G+       +      L +G   N ++++R         +
Sbjct: 470  QIGLPPDQVIGRTATDLDLWGVEGSGPLLLER----LHQGGIRNLEMSFR---RSNGQLF 522

Query: 373  LESRARLYRDEQGAPLRMAGTLLDITDQVEREQRLTASEEKFASLFQVSPDPICVTCLDG 432
                +    +  G P  +   + DI+   E +Q+L  SEEKFA  F  SPD + ++    
Sbjct: 523  TGLTSAETFELDGTPALVVA-VRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSD 581

Query: 433  GTFIEINPAFTQTFGWTAAEVIDKSAEQIGLWDESSKRLQRIERVIREQALSNVAIVAHH 492
            G  +E+N  F +  G+     ID+++  +G+W + ++R + ++++ R+  + +       
Sbjct: 582  GLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIWVDLNERKRLVDQLNRDGFVRDFTCHIRR 641

Query: 493  KNGQALTCVISSRLIKVGDQPCIVTTLRDITQQQRSEAALKASEEKFAKAFHSSPDAISI 552
             +GQ   C +S+R + +    C++T  RDIT++   +  L+ +    A  F ++ + + I
Sbjct: 642  SDGQIRLCELSARPLPITGVDCMLTIARDITERHLMQEKLQLA----ATVFENTAEGVLI 697

Query: 553  TERDTGRYVEVNDGFCRLTGYRAEEAIGLTLYQIGIWADENQRAALLA---ELQIKGRIN 609
            T+ D  R   VN  F  +TGY   EA+G T   +   + ++  A  LA   +L  +G   
Sbjct: 698  TDIDQ-RISAVNRAFSEITGYSEIEALGQTPRLLA--SGQHDSAFYLAMWHQLTAEGHWQ 754

Query: 610  YLEMLWHNKRGELLAVEVSVEPITLNETPCLLLTA--RDVSLLKNAQAQIRHLAYHDPLT 667
              E+    K GEL    +++  +  ++       A   D+S +K+AQA++ + A+HDPLT
Sbjct: 755  G-EIYNKRKNGELYPSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLT 813

Query: 668  NLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIVTARLE 727
             LPNR L  +RL   +   +  N +GA+LFLDLD FKHINDSLGHPVGD +LK +  RL+
Sbjct: 814  GLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLK 873

Query: 728  ASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQELADTLRELLSEPMFLDGHRLQVT 787
              VR  DTVARLGGDEF++LL GL        +    +A+ L    + P     H    +
Sbjct: 874  EQVRDVDTVARLGGDEFIILLPGL-----HKPSDASTIANKLLACFNAPFQAGEHEFFTS 928

Query: 788  PSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNTTQMFHNSMQKTASERLRMETDLRL 847
             SIG++L P  G+  + L++ AD A+YR+K  GRN  + +   +   ASER+ +E +LR 
Sbjct: 929  ASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELRR 988

Query: 848  ALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQLGAQSPSEFIKVLEDSGLILEVGTW 907
            A+ R E S+ +QP++  +   +VGAEAL+RW HP  G   P  FI + E++G IL++G W
Sbjct: 989  AVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDW 1048

Query: 908  ILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQNDFVERVERSLKQHKLPFSLLKLE 967
            +L++AC   Q         P    L +N++  Q R      R+E+ LK H+L    L+LE
Sbjct: 1049 VLEQACRQMQAWKQH--YQPFG-PLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLE 1105

Query: 968  ITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDA 1027
            ITE  ++   ++ ++ + +LKKLGV  A+DDFGTGYSSL+YLKRLP+D LKID+SF+R  
Sbjct: 1106 ITENFIMSQAEEALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGL 1165

Query: 1028 THDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLAFLQGLGCHLYQGYLHSRPLP 1083
              DP+DA I RAI+A+ RS+ L +IAEGVE Q Q  FL   GC   QGY+ S PLP
Sbjct: 1166 PDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLP 1221



 Score =  110 bits (274), Expect = 9e-28
 Identities = 122/506 (24%), Positives = 218/506 (43%), Gaps = 36/506 (7%)

Query: 41  LGAWCWEIDSGRISWSRGT---QALFGFDPRQPLPNDLD---YLDLLAPEDSARVVRAFH 94
           L A  WE D+   ++S  +   + L G+    PL + L    +  +L PED A   +A+ 
Sbjct: 320 LSAIAWEADANDFTYSYVSPHAEDLLGY----PLSDWLRPGFWRSILHPED-ALWAQAYC 374

Query: 95  AVLAGEPFEQAMHHHIQWPDGSLHWLEINGSLAPDKAGRRRMIGVIREITHQRDRENALS 154
                   + ++ + +   DG   W+    S+  +   +  M G++ +I+  +  E+AL 
Sbjct: 375 DSETAAGRDHSLDYRVIRADGQPLWVRNIVSMI-EHGHQPVMRGLMIDISETKRTEDALR 433

Query: 155 HSEKRFATLFHLCPNMVLLTRQADGLISEANQYFEMLFGWPLADAIGRTTLDLGLWRHPE 214
            SE++FA++F  CP+++L+ R +DG + E N+ FE   G P    IGRT  DL LW   E
Sbjct: 434 LSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLW-GVE 492

Query: 215 QRAQLVKATQRKGEPITMEVQFCASNGQIHDGTLSAQKVELEGEAYLISTFLDTTERKNA 274
               L+     +G    +E+ F  SNGQ+  G  SA+  EL+G   L+    D ++ K  
Sbjct: 493 GSGPLLLERLHQGGIRNLEMSFRRSNGQLFTGLTSAETFELDGTPALVVAVRDISQLKET 552

Query: 275 EQALKDSQERLDLALDSAQLGTWDWHIPTGMLY----GSARAAQLHGLPPEPFHESFDAF 330
           +Q L+ S+E+   A  ++  G        G+L     G  R    + L P     S D  
Sbjct: 553 QQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTG-YDLNPTIDQTSLDL- 610

Query: 331 FEGMPDDERESMRNAYRTLREGPAGNYQLTYRVPMEDGSSRYLESRARLYRDEQGAPLRM 390
             G+  D  E  R   +  R+G   ++  T  +   DG  R  E  AR        PL +
Sbjct: 611 --GIWVDLNERKRLVDQLNRDGFVRDF--TCHIRRSDGQIRLCELSAR--------PLPI 658

Query: 391 AGT--LLDITDQVEREQRLTASEEKFASLFQVSPDPICVTCLDGGTFIEINPAFTQTFGW 448
            G   +L I   +     +    +  A++F+ + + + +T +D      +N AF++  G+
Sbjct: 659 TGVDCMLTIARDITERHLMQEKLQLAATVFENTAEGVLITDID-QRISAVNRAFSEITGY 717

Query: 449 TAAEVIDKSAEQIGLWDESSKRLQRIERVIREQALSNVAIVAHHKNGQALTCVISSRLIK 508
           +  E + ++   +      S     +   +  +      I    KNG+     ++   ++
Sbjct: 718 SEIEALGQTPRLLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWLTISAVR 777

Query: 509 VGDQPC--IVTTLRDITQQQRSEAAL 532
             D+     V    DI+  + ++A L
Sbjct: 778 NSDREITHFVAVFADISSIKHAQAKL 803