Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 324 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  105 bits (263), Expect = 1e-27
 Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 12/295 (4%)

Query: 1   MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVGLTEA 60
           M+L     F+AI + GS S A ++L + Q A+SK++A LE +L  +L  R    V +TEA
Sbjct: 1   MELRQFRYFVAIVDCGSLSRAAQQLFIAQSALSKQMAELESELGTQLLLRSRNGVAMTEA 60

Query: 61  GRALLPRAYQILNVLDDTRRALTNLTGEVSGRLTLATSHHIGLHRLPPVLRTFTREYPNV 120
           G+     A  I   + D + A+   +  V G +  A    +      P++R   R YP+V
Sbjct: 61  GKVFYEYAQGITKQVSDAKAAVHVASDSVVGSVVAALPQSVSPMIALPLMRAAARRYPDV 120

Query: 121 ALDIQFLDSEVAYEEILHGRAEVAVITLAPDPHNLVRATPVWDDPLDFVVAPE--HSLIS 178
            L +    +    +++L GR +VAV +    P   +  TP+ ++   F+ +P+  H+L  
Sbjct: 121 VLHLNEELTGNMADQLLRGRVDVAVFS-PTMPAEDIAFTPLVEEDFVFLESPQSPHAL-P 178

Query: 179 NGSVSLADIAGHPAVFPGG--NTFTHHIVSRLFEAQGLTP-NIAMSTNYLETIKMMVSIG 235
            G VS+      P V+P       T  +V  + E  G +P  +A   N + T+K  V  G
Sbjct: 179 PGDVSIEQATARPLVWPANAHGHCTRWLVDGVLETAGYSPAQVAAEINSVYTLKAAVEAG 238

Query: 236 LAWSVLP-----RTMLDEQVASIALPGIQLSRQLGYIVHTERTLSNAARAFMSLL 285
           L  +++P     R + + ++A+  +    + R LG  V      +NA RA  +L+
Sbjct: 239 LGPTIMPLGLAQREVKEGRLAAHRIASPAMFRTLGLCVSVHLPTTNAKRAVCALI 293