Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  117 bits (292), Expect = 4e-31
 Identities = 99/310 (31%), Positives = 144/310 (46%), Gaps = 36/310 (11%)

Query: 1   MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVGLTEA 60
           M+L +L  FIA+AE   F  A ++L ++QP +S++I  LEQ+L  RLFDR  R V L+EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 61  GRALLPRAYQIL----NVLDDTRRALTNLTGEVSGRLTLATSHHIGLHRLPPVLRTFTRE 116
           GR  L  A Q+L       D  RRA     GE+    T +        ++P  +  F + 
Sbjct: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPF---TSKIPKAIHAFRQR 117

Query: 117 YPNVALDIQFLDSEVAYEEILHGRAEVAVITLAPDPHNLVRATPVWDDPLDFVVAPEHSL 176
           +P V L+++ + S    E +     EV ++   P P  LV AT ++ +PL  V+   H L
Sbjct: 118 FPAVHLNLKEMSSRDVAEGVFDESIEVGLMRPMPLPEGLV-ATELFREPLVAVINASHPL 176

Query: 177 I--SNGSVSLADIAGHPAVF--PGGNTFTHHIVSRLFEAQGLTPNIAMSTNYLETIKMMV 232
              +   V +A +A  P VF      +  H  +  L    G +P+ A       TI  +V
Sbjct: 177 AEGTEQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLV 236

Query: 233 SIGLAWSVLP-------------RTMLDEQVASIALPGIQLSRQLGYIVHTERTLSNAAR 279
           S GL  SVLP             RT+LDE+  +             ++V  ER  S  A+
Sbjct: 237 SAGLGVSVLPASFQRMRIEGVVYRTLLDEEAMTAV-----------WLVQRERGHSVMAK 285

Query: 280 AFMSLLDAQV 289
           AF  LL  QV
Sbjct: 286 AFAELLTGQV 295