Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 293 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  112 bits (281), Expect = 8e-30
 Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 11/289 (3%)

Query: 3   LANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLKVRLFDRLGREVGLTEAGR 62
           L  L  F  + ++GS + A   L L+Q A+S  +  LE QL V+LFDR+G+ + + E GR
Sbjct: 5   LRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGR 64

Query: 63  ALLPRAYQILNVLDDTRRALTNLTGEVSGRLTLATSHHIGLHRLPPVLRTFTREYPNVAL 122
            L PRA  +L    +    +  L  E +G + +  S  IG + LP V+  +  +YP + +
Sbjct: 65  LLYPRALALL----EQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPI 120

Query: 123 DIQFLDSEVAYEEILHGRAEVAVITLAPDPHNLVRATPVWDDPLDFVVAPEHSLISNGSV 182
           ++   +S+   + +L  R ++  I   P     + + P  +D L    AP  S ++ G V
Sbjct: 121 ELSVGNSQDVMQAVLDFRVDIGFIE-GPCHSTEIISEPWLEDELVVFAAPT-SPLARGPV 178

Query: 183 SLADIAGHPAVFPGGNTFTHHIVSRLFEAQGLTPNIAMSTNYLETIKMMVSIGLAWSVLP 242
           +L  +A  P +     + T  IV  L  +      +AM     E IK  V  GL  S L 
Sbjct: 179 TLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLS 238

Query: 243 RTMLDEQ-----VASIALPGIQLSRQLGYIVHTERTLSNAARAFMSLLD 286
           R ++++Q     ++ +A+P  +L R L  I H ++ LSNA R F+   D
Sbjct: 239 RRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYCD 287