Pairwise Alignments

Query, 274 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 256 a.a., tRNA pseudouridine(38-40) synthase TruA from Magnetospirillum magneticum AMB-1

 Score =  182 bits (462), Expect = 6e-51
 Identities = 110/244 (45%), Positives = 139/244 (56%), Gaps = 2/244 (0%)

Query: 8   RIALGVEYKGSRYRGWQRQASGVLTVQETLENALSKVADSPVSLMCAGRTDAGVHACGQV 67
           R  L VEY G+ + GWQRQ  G L+VQ  LE A+ K+   P +L  AGRTDAGVHA GQV
Sbjct: 3   RYRLLVEYDGTPFNGWQRQDKG-LSVQGILEKAVEKLCGVPCTLHAAGRTDAGVHATGQV 61

Query: 68  VHFDTQAERSMKAWVMGANINL-PHDVSVTWAKVMPAHFHARFKAIARRYRYVIYNDQIR 126
            H D   +          N ++ P  V+V  A+++   FHARF A+ R Y Y I N +  
Sbjct: 62  AHVDLPRDYPADTVRDALNYHMKPKPVAVVAAELVDEDFHARFSAVGRAYLYRIVNRRAP 121

Query: 127 PAHLNEEITWNHRPLDAERMAEAAQHLVGVHDFSAFRAGQCQAKSPIKEVHHLRVTRHGK 186
            A       W    LDAE MAE A+ L+G HDFS FRA +CQAKSP+K +  L VTR G+
Sbjct: 122 LALDQHRAWWVPVALDAEAMAEGARRLLGHHDFSTFRASECQAKSPMKTLDVLDVTRVGE 181

Query: 187 MIVLDIRAGAFLHHMVRNIAGVLMTIGTGERPVEWAKEVLESRVRRTGGVTAHPFGLYLV 246
            I +   A +FLHH VRN+ G L  +G G+   +   +VLE+R R  GG TA   GL L 
Sbjct: 182 EIRIVAEARSFLHHQVRNMVGTLKLVGEGKWSPDDMAKVLEARDRTKGGPTAPAAGLVLT 241

Query: 247 DVEY 250
            V Y
Sbjct: 242 GVSY 245