Pairwise Alignments

Query, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 442 a.a., Copper sensory histidine kinase CusS from Variovorax sp. SCN45

 Score =  209 bits (532), Expect = 1e-58
 Identities = 140/459 (30%), Positives = 237/459 (51%), Gaps = 26/459 (5%)

Query: 8   SLTLRLALIFALLAFALLATLGVALYRELERELIMRDDAALIYRIDQLRNLLND-SNTLD 66
           S+   L+  FA+     L+ + VA+Y        ++     +  I+ +++++ + SN  D
Sbjct: 5   SIQTSLSRWFAIQTLIGLSFVCVAVYAATRWSFQLKQSEEFLRYIELVQHVVEETSNPPD 64

Query: 67  LIKTKPELFQNMLGNRESALSIAAPGQQPLLTVNPGNINLPSVPPVPKNHKLTFADVHHF 126
           L   + +L    L + ++A ++    +Q  L+  PG        P  K + +T   +   
Sbjct: 65  LNALRHKLGDYFLSHPDAAAAVWVGEEQVYLS--PG--------PAAKGNWVTRDRMLEG 114

Query: 127 PGINGVPFATVAASIDSGDLGSLQVTTGRLMTERTAVLASYRLSVYVLASIAAIILAVVG 186
             I+G P              +L V+   L+  R A       ++++  ++ ++++A  G
Sbjct: 115 LAIDGKPIKLQL---------TLDVSKDDLLLRRLA------WTLFLATTLGSLLVAFTG 159

Query: 187 YLLVHRGLLPLRRLARHAQGIGVGNLAERLDSHGAPKELLPMIDSFNTMLERLAKGFVQL 246
            L+V RGL  L+ LA      G  N   R+D+     EL P +  FN +LER+   + QL
Sbjct: 160 SLVVRRGLKQLKLLAAKTAEAGPENAGIRIDASKYASELQPWVGQFNALLERVEGAYEQL 219

Query: 247 GQVSTDMAHELRTPINNLLGETQVALQQNRSIESYQQLLASNVEELERLARMLDNMLFLA 306
              + D+AHELRTP+ N++ + +V L Q RS+ + Q  L+S +EE  RL+ ++ +MLFL+
Sbjct: 220 ESFNADVAHELRTPLANMIAQAEVELSQARSVAALQDALSSQLEEAHRLSGIVTDMLFLS 279

Query: 307 RTDPASALRQRQELNAADEVERIAEYFEGLAGDVDISIHAEGDGVIWAEPMLLRRALANL 366
           + D  +  R+   ++ A++V  +AE+ E      ++S+  +GD  +  +  LLRRA++NL
Sbjct: 280 KADRGARARRTGPVSIAEQVAAVAEFHEAELEAAELSLKIDGDANLLVDVGLLRRAVSNL 339

Query: 367 CANAIKYGAPGTVLQIRAVPSAEGIHLRVSNRGETIAAEHLPQLFERFYRVDESRERSAQ 426
            +NAI+Y  P +++++     A  I L V NRGE I    LP LFERFYR D SR  S+ 
Sbjct: 340 VSNAIRYATPQSLIRVAIEQEANAIRLFVDNRGEPIDPSALPHLFERFYRADRSRSGSSS 399

Query: 427 SNGLGLSIVATIMQLHNGRYDVSSEAGVTCFELFFPKRE 465
            +GLGL+IV+ I ++H G    SS  GVT   L   + E
Sbjct: 400 HHGLGLTIVSAIARMHGGSTFASSAGGVTRIGLVLAQPE 438