Pairwise Alignments

Query, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 469 a.a., copper sensor protein from Pseudomonas putida KT2440

 Score =  222 bits (566), Expect = 2e-62
 Identities = 142/462 (30%), Positives = 248/462 (53%), Gaps = 18/462 (3%)

Query: 8   SLTLRLALIFALLAFALLATLGVALYRELERELIMRDDAALIYRIDQLRNLLN-DSNTLD 66
           SL  RL L+      A+L   G++     +    M D+ AL  +++  R++L+  +    
Sbjct: 7   SLVKRLTLMIMFAVIAVLVVAGISFNMLSQHHFRMLDEQALSEKLESTRHILSIQAPGTG 66

Query: 67  LIKTKPELFQNMLGNRESALSIAAPGQQPLLTVNPGNINLPS-VPPVPKNHKLTFADV-H 124
           + + +P+L + +LG  +   +     +  +L  +   + +P       K     + D  H
Sbjct: 67  MEELRPQL-RALLGAHQDLTAEILTSEGEVLFSDLKAVQIPDKYKRADKEEMWEWQDESH 125

Query: 125 HFPGINGVPFATVAASIDSGDLGSLQVTTGRLMTERTAVLASYRLSVYVLAS---IAAII 181
           +F GI          + D    G     T  LM + T+    +       A    I+A++
Sbjct: 126 NFRGI----------TTDVEIQGQPAPGTVMLMLDITSHAHFFETLQRWFAIGLVISALV 175

Query: 182 LAVVGYLLVHRGLLPLRRLARHAQGIGVGNLAERLDSHGAPKELLPMIDSFNTMLERLAK 241
            A +G+L+   GL P+ ++ + A  I   +L ER+     P EL  +I SFN ML RL  
Sbjct: 176 SAGIGWLVAKSGLRPVEQITKVATSISARSLQERIPLEPVPLELQTLILSFNGMLARLED 235

Query: 242 GFVQLGQVSTDMAHELRTPINNLLGETQVALQQNRSIESYQQLLASNVEELERLARMLDN 301
            FV+L   S D+AHELRTP++NLL  T+V L + R +++Y++ L SN+E+L+R++RM+D+
Sbjct: 236 AFVRLSNFSADIAHELRTPVSNLLTHTEVVLTRKRDVDAYEENLYSNLEDLKRMSRMIDD 295

Query: 302 MLFLARTDPASALRQRQELNAADEVERIAEYFEGLAGDVDISIHAEGDGVIWAEPMLLRR 361
           MLFLA++D    + ++ ++   D V ++ EY++ LA D  I +  +G GVI  + +++ R
Sbjct: 296 MLFLAKSDNGLIIPEQVDIQLHDLVSKLFEYYQLLADDRGIRLTLQGKGVISGDRLMIDR 355

Query: 362 ALANLCANAIKYGAPGTVLQIRAVPSAEGIHLRVSNRGETIAAEHLPQLFERFYRVDESR 421
           A++N+ +NA++Y   G+ + +    +A+ + L + N G TI  +H+ ++F+RFYR D +R
Sbjct: 356 AVSNILSNAVRYTPDGSGISVEIQQAADKVTLTIKNGGATIDPQHINKIFDRFYRADPAR 415

Query: 422 ERSAQSN-GLGLSIVATIMQLHNGRYDVSSEAGVTCFELFFP 462
                SN GLGL+I  +I++ H+G+   +S  GVT F   FP
Sbjct: 416 REGGPSNAGLGLAITRSIVKAHDGKVWCTSSEGVTAFNFIFP 457