Pairwise Alignments

Query, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 451 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  118 bits (295), Expect = 5e-31
 Identities = 116/448 (25%), Positives = 202/448 (45%), Gaps = 42/448 (9%)

Query: 8   SLTLRLALIFALLAFALLATLGVALYRELERELIMRDDAALIYRIDQLRNLLNDSNTLDL 67
           S  +RLA+I+ +L         +  Y+ + R L  R +A +  R  ++ +          
Sbjct: 9   STAVRLAIIYIVLFVTASLGANITAYQMVVRFLDERLNANVQERYREIASAFEARGLQGA 68

Query: 68  IKTKPELFQNMLGNRESALSIAAPGQQPLLTV-NPGNINLPS---VPPVPKNHKLTFADV 123
           +        +M+ N      +A  GQ+ +  + NP    L        VP  + +   D 
Sbjct: 69  V--------DMIDNH----GLAIRGQETIYALRNPAGQLLAGSNRFSNVPSGYSILEPDD 116

Query: 124 HHFPGINGVPFA------TVAASIDSGDLGSLQVTTGRLMTERTAVLASYRLSVYVLASI 177
           HH    +   F+      T+   I+SGD   L             VL S+  +  ++ S+
Sbjct: 117 HHGSASHYKLFSGPLGPNTLVVGINSGDTDELA----------RIVLISFGCATAIVLSV 166

Query: 178 AAIILAVVGYLLVHRGLLPLRRLARHAQGIGVGNLAERLDSHGAPKELLPMIDSFNTMLE 237
                A++ Y   HR    +  LA+ A  IG G L+ RL       E+  +    N  L 
Sbjct: 167 GMAGAAILAYRTRHR----ISSLAQIAHAIGHGELSRRLPVSSRMDEIDILSAEINVALA 222

Query: 238 RLAKGFVQLGQVSTDMAHELRTPINNLLGETQVALQQNRSIESYQQLLASNVEELERLAR 297
           RL      L QV+ D+AH+L+TPI       + AL  + +++  +  + + +EEL+ +A 
Sbjct: 223 RLDSSVAALKQVTIDVAHDLKTPIGRTFLVLEDALNAH-TVDEMRIGVETALEELQSIAN 281

Query: 298 MLDNMLFLARTDPASALRQRQELNAADEVERIAEYFEGLAGD--VDISIHAEGDGV-IWA 354
             D +L +A+ +  S   +    +  D V  I E +E +A +   ++S+     G  I  
Sbjct: 282 TFDALLRIAQIEARSRTARFIAFDLCDVVGDIYETYEVIAEEEGYELSMRGAASGCRING 341

Query: 355 EPMLLRRALANLCANAIKYGAPGTVLQIRAVPSAEGIHLRVSNRGETIAAEHLPQLFERF 414
           +P L+R+ LANL +NA+++   G+ + +        I L +++ G  I+ E   Q+F+RF
Sbjct: 342 DPDLIRQLLANLLSNAMRHTPAGSSISLGVSRQDGRILLDIADNGPGISDEDRAQVFDRF 401

Query: 415 YRVDESRERSAQSNGLGLSIVATIMQLH 442
           YRV++S  R+   +GLGLS+V  I +LH
Sbjct: 402 YRVEKS--RTTAGSGLGLSLVKAIAELH 427