Pairwise Alignments

Query, 517 a.a., D-ribose ABC transporter, ATPase component RbsA (from data) from Pseudomonas simiae WCS417

Subject, 524 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

 Score =  767 bits (1981), Expect = 0.0
 Identities = 401/514 (78%), Positives = 438/514 (85%)

Query: 1   MSSSAPNAVLSVSGIGKTYAQPVLSDITLTLNRGEVLALTGENGAGKSTLSKIIGGLVTP 60
           M + A   VL+ SG+GKTYAQPVL +++L+L  GEVLALTGENGAGKSTLSK+I GL  P
Sbjct: 8   MPALANEVVLAASGLGKTYAQPVLGEVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVP 67

Query: 61  TTGHMQFNGQDFRPGSRTQAEELGVRMVMQELNLLPTLTVAENLFLDNLPSHCGWISRKQ 120
           TTGHM + GQ + PGSR +AE LGVRMVMQELNLLPTLTVAENLFLDNLPS  GWIS K+
Sbjct: 68  TTGHMTYRGQAYAPGSRGEAERLGVRMVMQELNLLPTLTVAENLFLDNLPSRFGWISHKR 127

Query: 121 LRKAAIEAMAQVGLDAIDPDTLVGSLGIGHQQMVEIARNLIGDCHVLILDEPTAMLTARE 180
           LR+ A  AMA+VGLDAIDPDT VG LGIGHQQMVEIARNLIGDCHVLILDEPTAMLTARE
Sbjct: 128 LRQLATAAMARVGLDAIDPDTPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTARE 187

Query: 181 VEMLFEQITRLQARGVAIIYISHRLEELARVAQRIAVLRDGKLVCVEPMANYNSEQLVTL 240
           V +LF QI RL+ARGVAI+YISHRLEEL RVAQRI VLRDGKLVC EP+  Y+S +LV L
Sbjct: 188 VALLFTQIERLRARGVAIVYISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNL 247

Query: 241 MVGRELGEHIDLGPRTIGGPALTVKGLTRSDKVRDVSFEVRAGEIYGISGLIGAGRTELL 300
           MVGRELGEHIDLG R +G P L V  L R DKVR+VSFEVRAGEI+GISGLIGAGRTELL
Sbjct: 248 MVGRELGEHIDLGRRQLGAPLLKVDKLCRGDKVREVSFEVRAGEIFGISGLIGAGRTELL 307

Query: 301 RLIFGADLADSGTVALGSPAQVVSIRSPVDAVGHGIALITEDRKGEGLLLTQSISANIAL 360
           RLI+GAD ADSG +ALG P Q VSI SP  AV  GIALITEDRKGEGLLLTQSISANIAL
Sbjct: 308 RLIYGADRADSGGIALGQPPQAVSIDSPKAAVRAGIALITEDRKGEGLLLTQSISANIAL 367

Query: 361 GNMPEISGGGVVNSRDETALAKRQIDAMRIRSSSPAQLVSELSGGNQQKVVIGRWLERDC 420
           GN+  +S  GV++S  E ALA+RQI AMRIRS+   Q+V ELSGGNQQKVVIGRWLERDC
Sbjct: 368 GNLGAVSRAGVLDSEAEKALAERQIQAMRIRSAGAQQVVGELSGGNQQKVVIGRWLERDC 427

Query: 421 SVMLFDEPTRGIDVGAKFDIYALLGELTRQGKALVVVSSDLRELMLICDRIGVLSAGRLI 480
            V+LFDEPTRGIDVGAKFDIY LL EL RQGKALVVVSSDLRELMLICDRI VLSAGRLI
Sbjct: 428 QVLLFDEPTRGIDVGAKFDIYGLLAELARQGKALVVVSSDLRELMLICDRIAVLSAGRLI 487

Query: 481 ETFERDSWTQDELLAAAFAGYQKRDALLNDAVLR 514
           +TF RD W+QD+LLAAAFAGYQKRDALL+DA  R
Sbjct: 488 DTFARDHWSQDQLLAAAFAGYQKRDALLHDAAPR 521