Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  302 bits (774), Expect = 8e-87
 Identities = 167/336 (49%), Positives = 216/336 (64%), Gaps = 6/336 (1%)

Query: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTA 60
           MATIKDVA  A +S TTVSHVVN TR VS  VR +VE AI++L YVP+A+ARSLK+ TT+
Sbjct: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60

Query: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGLI 120
           T+G+L+PNS NPYFAE+ R +ED C   GY ++LCN+DD   +Q  YL+VL E+RIDGLI
Sbjct: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120

Query: 121 VTSVG-GDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRD 179
           V   G GDD  L   L  +R P V+VDR +     DLV   H +G  LA RHLL LGH+ 
Sbjct: 121 VVLTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKR 180

Query: 180 IACIGGPAHTRVAQMRLAGYHRALREAGVTV-AANRTQ---ESDFTSTGGYTAAVQLL-T 234
           IACIGG A    ++ R+ G+  AL EAG T   AN         FTS GGY A   +L T
Sbjct: 181 IACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRT 240

Query: 235 ENPPSAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQ 294
           E  PSA+F  ND++  G LRAA E  +RVP +LS++GFDDI++  Y  P LTTV Q   +
Sbjct: 241 ERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKER 300

Query: 295 LGETAAELLLRRIATPHMPIDQRIVTPSIVLRESTA 330
           +G  A ++LL ++        + ++ P + +R STA
Sbjct: 301 IGAMAVDMLLEQMGGKRRDARKVVLQPELRVRASTA 336