Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 341 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score =  191 bits (484), Expect = 3e-53
 Identities = 108/331 (32%), Positives = 183/331 (55%), Gaps = 6/331 (1%)

Query: 2   ATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTAT 61
           AT+KDVA  A +S  TVS  +     VS+  R +VE A +++ Y+P  + R++K   + T
Sbjct: 10  ATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRT 69

Query: 62  IGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGLIV 121
           I ++VP+  +P+F+E+ RGIE     +GY V++ +     ++++ ++ +++ K+IDG+++
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLL 129

Query: 122 TSVGGDDSGLAAGLSAVRT--PMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRD 179
               G      A +   R   PMV+ +     +++  V ID+   A+ A  +L E GH+ 
Sbjct: 130 L---GSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKR 186

Query: 180 IACIGGPAHTRVAQMRLAGYHRALREAGVTVAANRTQESDFTSTGGYTAAVQLL-TENPP 238
           I CI GP    +   RL GY +ALR  G+ V        DFT   G  A  QLL    PP
Sbjct: 187 IGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPP 246

Query: 239 SAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLGET 298
           +A+F  +D++  G L  A  + ++VP +LS+IGFD+I + ++  P LTT+ Q   ++G  
Sbjct: 247 TAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGRE 306

Query: 299 AAELLLRRIATPHMPIDQRIVTPSIVLREST 329
           A  LLL ++   H+    R++   +++R ST
Sbjct: 307 AMLLLLDQMQGQHVGSGSRLMDCELIIRGST 337