Pairwise Alignments

Query, 235 a.a., 16S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 239 a.a., 16S rRNA m3U1498 methyltransferase from Pseudomonas putida KT2440

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 16/214 (7%)

Query: 26  HMQEVHRAVVGDSLRVGRIGGLMGNAQLLRLEATEAELQVSVDQP--PPAKLPLTLLLA- 82
           ++  V R   GD++++    G     QLL  E  +  ++VS+DQ     A  PL + L  
Sbjct: 26  YIGRVLRMAPGDAVQLFDGSGQEYRGQLL--EVGKKTVRVSLDQAFAGQADSPLHVHLGQ 83

Query: 83  -LPRPKMLRRVLQTVAAMGVPKVVLVNSYRVEKSFWQTPFLEPEAI-REQLILGLEQARD 140
            L R + +   +Q    +G  ++  + S R E         +  A  R+  I   EQ   
Sbjct: 84  GLSRGERMDWAIQKATELGANEITPIVSERCEVRLKDERADKRLAHWRQVAISACEQCGR 143

Query: 141 TVLPEIIIEKRFKPFVEDRLPAMAAGSLGLIGHPGDYPACPRGLDEPVTLA--IGPEGGW 198
           + LP I       P       +     L L+ HP   P      ++P TLA  IGPEGG 
Sbjct: 144 STLPVI-----HPPVTLAEWLSSTKADLKLVLHPVAEPLISH--EKPATLAFVIGPEGGL 196

Query: 199 IPYEVDLLTQAGLQPVQLGARILRVETAVTALLA 232
              EV+    AG    +LG R+LR ETA    L+
Sbjct: 197 SEAEVEQAKAAGFHAARLGPRVLRTETAPVVALS 230