Pairwise Alignments

Query, 342 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 304 a.a., ribonucleoside hydrolase 3 (NCBI) from Escherichia coli BW25113

 Score =  174 bits (440), Expect = 3e-48
 Identities = 113/311 (36%), Positives = 177/311 (56%), Gaps = 13/311 (4%)

Query: 31  KIDLIIDTDPGADDVVALLFAMASPDELNIRALTTVAGNVRLDKTSRNA-RLAREWAGRE 89
           ++ + +DTDPG DD VA+  A+ +P EL+++ +TTVAGNV ++KT+RNA +L   W    
Sbjct: 2   RLPIFLDTDPGIDDAVAIAAAIFAP-ELDLQLMTTVAGNVSVEKTTRNALQLLHFW--NA 58

Query: 90  EIPVYAGAPAPLLRKPIYAENIHGKEGISGVT-VHEPKKGLADGNAVDYLIKTLSTAKPH 148
           EIP+  GA  PL+R P  A ++HG+ G++G   V   +K L  G      I+      P 
Sbjct: 59  EIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPL--GIPAFLAIRDALMRAPE 116

Query: 149 SITIAMLGPQTNLALALTQAPEITQGIKEVVVMGGAHFNGGNITPVAEFNLFADPVAAEI 208
            +T+  +GP TN+AL L+Q PE    I+ +V+MGG+    GN TP AEFN+ ADP AA  
Sbjct: 117 PVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSA-GRGNCTPNAEFNIAADPEAAAC 175

Query: 209 VLKSGVKLTYLPLDVTHKVLTSEARLKKIADIKNNASKVVGDILNEYVKGDMEHYGIPGG 268
           V +SG+++    LDVT++ + +   L  +  + N   K++  + + Y  G M+     G 
Sbjct: 176 VFRSGIEIVMCGLDVTNQAILTPDYLSTLPQL-NRTGKMLHALFSHYRSGSMQ----SGL 230

Query: 269 PVHDATVIAYLLKPSLFSGRQANMVVDSREGPTFGQTIVDWYDGLKQDKNVFWVENGDAQ 328
            +HD   IA+L++P LF+ +   + V+++   T G T+VD    L +  NV    + D +
Sbjct: 231 RMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLDVK 290

Query: 329 GFFDLLTERLA 339
           GF   + E LA
Sbjct: 291 GFQQWVAEVLA 301