Pairwise Alignments

Query, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  498 bits (1283), Expect = e-145
 Identities = 300/645 (46%), Positives = 411/645 (63%), Gaps = 13/645 (2%)

Query: 5   LAEKLGNISVKTKLGVGFGLVLLLTLLIMFTGWTGLGDVTSRGDKLGHISSLNGLTKDLR 64
           L  KLGNISV  KL +GF +VLLLTL    +GW  L     R  +L  I  +N LTKDLR
Sbjct: 5   LNRKLGNISVAAKLALGFAVVLLLTLATTISGWRALDGAIVRSQQLSEIGLINDLTKDLR 64

Query: 65  LARLDFEMRRGEQGTDAVNNLIAKLDSGLQTAADLIEQPDDKALVEQQQDALSQYKKAFA 124
             R+ + +   +     ++N++ +L+S L T        + + L+ ++   L + +  F+
Sbjct: 65  AERITYRVLNDDASKARISNILDQLNSMLTTLQQRSNVDESRQLLTEKMALLQRLRDNFS 124

Query: 125 TMVQAGLKREGARSKLGDTADNAVAKVSEVE-KSLLQGDSVTQFNSVVDL----SKLIQQ 179
            + ++   R   R  L          + +++ ++LL+    +Q + V+ L    S+ ++ 
Sbjct: 125 ELQRSVASRVALREALQSQEHALSEAIDQLQTQALLKMPDDSQQSGVLGLMDTLSRHVEG 184

Query: 180 ARFQ--VRGYTYSAK---VEAEQPALDAIDNAVKKITELQGQLPAQY-QANLEEASTSLQ 233
           A  Q  V  YT+       +    AL+A D+++ ++  L+G  P    +A  E+    L 
Sbjct: 185 ANQQSLVPAYTFVPVEDFAKVGDNALNAADSSLAQL--LEGLAPLGLPRAISEQPGVELS 242

Query: 234 AYRAAVSQYRDSQTAAAAALKIMSAQGDTLLGHSDKLTLSQTVVRDADAAHAKQLLLLAT 293
            YR ++ QYR +          M   G+ L   S  L   +   RD +A  A+ LL    
Sbjct: 243 KYRTSLDQYRRAAVRVEQLQNNMEIMGNELRTVSLDLGKRKVEQRDREALAARSLLTSVA 302

Query: 294 VLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNLTSMRQDELGQLQRAMQSMT 353
           +LA++ G +AAW IT QI  PL QTL VA R+A GDLS   T  R+DE+GQLQ +M+ MT
Sbjct: 303 LLAMVVGALAAWLITLQITQPLRQTLAVAARIAKGDLSQVDTVQRRDEMGQLQTSMREMT 362

Query: 354 VGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEVA 413
           + LR+LIGGI  GV Q++ AA QL+A +E T   +N Q+ ETDQVATAMN+M+ATVQEVA
Sbjct: 363 LSLRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMNQMSATVQEVA 422

Query: 414 RNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIGSVLD 473
           +NAE+AS AA  ADQQA+ GD+VV EAI +IE+LA ++ +   AM  L  ES +IGS+LD
Sbjct: 423 QNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGSILD 482

Query: 474 VIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQS 533
           VIKSV++QTNLLALNAAIEAARAGEAGRGFAVVADEVR LAQRT  +TEEI +LI  L +
Sbjct: 483 VIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQLIDSLHN 542

Query: 534 GTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQSAVAEE 593
           GT +V  ++D+S+ LT+ SVEL RRAG AL+ IT TVS+IQ MN QIATA+E+QS VAE+
Sbjct: 543 GTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATASEEQSVVAEQ 602

Query: 594 INRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGRFRV 638
           INRSV+NVRDVS+QT+AASE+TAASS EL +LG  L+ +VGRF +
Sbjct: 603 INRSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGMVGRFSI 647