Pairwise Alignments

Query, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 646 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  397 bits (1021), Expect = e-115
 Identities = 261/649 (40%), Positives = 369/649 (56%), Gaps = 30/649 (4%)

Query: 9   LGNISVKTKLGVGFGLVLLLTLLIMFTGWTGLGDVTSRGDKLGHISSLNGLTKDLRLARL 68
           L N+ +  KLG+GF LVLLLTL +   G   L  V  R D L  ++  N     LR    
Sbjct: 9   LANLGMARKLGLGFALVLLLTLAVAAIGVVALQSVGQRFDSLRQLAQFNTDLLRLREHEQ 68

Query: 69  DFEMRRGEQGTDAVNNLIAKLDSGLQTAADLIEQPDDKALVEQQQDALSQYKKAFATMVQ 128
            F +R   Q  DA       L  GLQ    L+E+      +   Q  L+ Y +AF   V+
Sbjct: 69  AFALRSDMQQADA-------LRGGLQ---GLVERARGLPALAAAQTDLAAYGQAFEAFVE 118

Query: 129 AGLKREGARSKLGDTADNAVAKVSEVEKSLLQ--------------GDSVTQFNSVVDLS 174
           A   +E A      +  N    +  ++  L                G+ + Q   V  +S
Sbjct: 119 AVQAKELALDMASWSVSNVSNNLDVLQAGLADDGVYTLKQSQGQQGGEFLEQAAQVAQVS 178

Query: 175 KLIQQARFQVRGYTYSAKVEAEQPALDAIDNAVKK---ITELQGQL-PAQYQANLEEAST 230
           +L+ QA  + R     ++   E  + + I   V+    +++LQG +  A YQ+ L E + 
Sbjct: 179 RLMLQAMDEARVRLEKSRKGEEGVSQERIAQTVEAAGLVSQLQGAVGDAGYQSVLGEVAG 238

Query: 231 SLQAYRAAVSQYRDSQTAAAAALKI-MSAQGDTLLGHSDKLTLSQTVVRDADAAHAKQLL 289
            + ++   +++Y D Q A    LK  + A  + + G  D+  L Q      +       +
Sbjct: 239 HIGSFSEKLNEYTD-QLAREQGLKAQLQASAERVTGRVDQAYLGQEQALQGELQRNAIAI 297

Query: 290 LLATVLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNLTSMRQDELGQLQRAM 349
            LAT LAL+ G++AAW ITR +V PL   +  AQR+A+G+L  +  + R+DE+GQL +AM
Sbjct: 298 GLATALALLVGVLAAWLITRAVVGPLKHVIARAQRIAAGELGFDAQAPRRDEVGQLMQAM 357

Query: 350 QSMTVGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATV 409
           Q M  GL  ++ G+  G+ Q+A +A+ LS VTEQT+  V SQK ET+QVATAM +M ATV
Sbjct: 358 QQMAAGLSGIVSGLQQGIEQLAGSAQALSTVTEQTNREVGSQKEETEQVATAMQQMTATV 417

Query: 410 QEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIG 469
            +VARNAEEA++AA AAD++   G +VV +++ +IE+LA+    ++  +  L  E   IG
Sbjct: 418 HDVARNAEEAAQAAQAADEKVDTGQQVVRQSMQRIEQLASAAEAASAGIDSLSAEIHTIG 477

Query: 470 SVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIV 529
            VL+VIKSVA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+RT++STE+IE L+ 
Sbjct: 478 DVLEVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTRQSTEQIETLVA 537

Query: 530 GLQSGTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQSA 589
            L+   QQ    +  S  L   +V    +  SAL SI   VS IQ MN QIA AAEQQS+
Sbjct: 538 SLRGNAQQSVAQIRGSTELVRLAVADALQTESALGSIAAAVSLIQQMNQQIAAAAEQQSS 597

Query: 590 VAEEINRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGRFRV 638
           VAEEI+RSV  +R  ++Q A A ++ A SS ELA+LGT L+ +VG FR+
Sbjct: 598 VAEEISRSVTQIRGSADQAALAMQDNARSSVELAQLGTDLKGMVGHFRL 646