Pairwise Alignments

Query, 394 a.a., hemolysin D from Pseudomonas simiae WCS417

Subject, 380 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  269 bits (688), Expect = 9e-77
 Identities = 153/376 (40%), Positives = 236/376 (62%), Gaps = 2/376 (0%)

Query: 6   IAKYLVTAAVFLSLIVLAMLGGCSGGEPPPEAVTPKVSVISIKPQSQVLTTELAGRTQAF 65
           ++K L      L+L +     G S  E P E    KV V +++ +   +T+EL+GR  A 
Sbjct: 1   MSKNLFAPFCLLALTLALSACGDSAAEAP-EMPLAKVRVETLEAKPLAITSELSGRIAAP 59

Query: 66  MVAQIRPQVGGIVQRRLFVEGADVKVGQALYQLDAASYTAALAQAEASLAKYRATLKSAQ 125
            +A++R +V G+V +R+F EG DVK G  L+++D A + A L  A+A+L+K  A    A+
Sbjct: 60  RIAEVRARVAGVVMQRVFKEGHDVKQGDVLFRIDPAPFKADLDSAQANLSKAEADAFKAR 119

Query: 126 ATARRDAELVKINAISQQDNEDAQATLLTAAADVQGAEADVQTARINLAYTRITSPVGGR 185
              +R ++LV+ NAIS QD ++A+A +    A+V   +A V+ AR+NL Y  +T+P+ GR
Sbjct: 120 LQEQRYSQLVEGNAISGQDYDNARAAVRQTNAEVAANKAAVERARLNLGYATVTAPISGR 179

Query: 186 IETSTVTPGALVVANQDSALTTVQQLDPIYVDVTQSTTELLKLKRDLASGALQSNGDGQA 245
           I  + VT GALV  N+ + L  +QQLDPI+ D+TQST EL  L+R   +G+L+  G  QA
Sbjct: 180 IGRALVTEGALVGQNEATPLALIQQLDPIHADLTQSTRELNDLRRAFRAGSLKQVGQDQA 239

Query: 246 RVSLKLDDGSAYNQQGRLKVSGVSVNEGTGTVTLRAEFANPDHLLLPGMYVRAVLEQARN 305
           + +L  DDGS Y   G+L  + +SV+ GTG + LR+EF NPD  LLPG +VR  LEQA +
Sbjct: 240 KATLIEDDGSLYPLPGKLLFAEISVDPGTGQIILRSEFPNPDLDLLPGSFVRVRLEQAVD 299

Query: 306 EQAILVPQKAVNRSASGVTTALLVVDGK-VEQRELTIDRAVGNQWWVTAGLQAGDQLIVE 364
           +Q I VPQ+A+ R ++G+   LL+  G+ V Q+ + +   + ++W V++GL+ GD++IVE
Sbjct: 300 KQGISVPQRAITRDSAGIPMVLLLDAGQTVSQQPVELGAVINDRWIVSSGLKPGDRIIVE 359

Query: 365 GGQKVRAGAAVQVQEA 380
           G Q  R G  V+V ++
Sbjct: 360 GLQHARPGEKVEVDDS 375