Pairwise Alignments

Query, 394 a.a., hemolysin D from Pseudomonas simiae WCS417

Subject, 384 a.a., Probable efflux pump periplasmic linker TtgA from Pseudomonas putida KT2440

 Score =  327 bits (837), Expect = 5e-94
 Identities = 188/375 (50%), Positives = 245/375 (65%), Gaps = 18/375 (4%)

Query: 8   KYLVTAAVFLSLIVLA-MLGGCSGGEPPPEAVTPKVSVISIKPQSQVLTTELAGRTQAFM 66
           K  VTA V  S + LA +L GC   E  P A  P+V V++I+PQ+  LT+EL GRT A+ 
Sbjct: 4   KPAVTALV--SAVALATLLSGCKKEEAAPAAQAPQVGVVTIQPQAFTLTSELPGRTSAYR 61

Query: 67  VAQIRPQVGGIVQRRLFVEGADVKVGQALYQLDAASYTAALAQAEASLAKYRATLKSAQA 126
           VA++RPQV GI+ +RLF EG++VK GQ LYQ+D A Y A LA A+A+L   R+       
Sbjct: 62  VAEVRPQVNGIILKRLFKEGSEVKEGQQLYQIDPAVYEATLANAKANLLATRSL------ 115

Query: 127 TARRDAELVKINAISQQDNEDAQATLLTAAADVQGAEADVQTARINLAYTRITSPVGGRI 186
            A R  +L+   A+S+Q+ +DA A  L A       EA +++A+I+L YT++ +P+ GRI
Sbjct: 116 -AERYKQLIDEQAVSKQEYDDANAKRLQA-------EASLKSAQIDLRYTKVLAPISGRI 167

Query: 187 ETSTVTPGALVVANQDSALTTVQQLDPIYVDVTQSTTELLKLKRDLASGALQSNGDGQAR 246
             S+ T GALV   Q  A+ T+QQLDPIYVDVTQST ELLKL+RDL SG LQ  GD  A 
Sbjct: 168 GRSSFTEGALVSNGQTDAMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGDNAAS 227

Query: 247 VSLKLDDGSAYNQQGRLKVSGVSVNEGTGTVTLRAEFANPDHLLLPGMYVRAVLEQARNE 306
           V L L+DGS + Q+GRL+ S V+V+E TG+VTLRA F NPDH LLPGM+V A L+   N 
Sbjct: 228 VQLVLEDGSLFKQEGRLEFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNA 287

Query: 307 QAILVPQKAVNRSASGVTTALLV-VDGKVEQRELTIDRAVGNQWWVTAGLQAGDQLIVEG 365
            AIL PQ+ V R   G  TAL+V  + KVE R+L   R +G+ W +  GL  GD+LI EG
Sbjct: 288 NAILAPQQGVTRDLKGAPTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEG 347

Query: 366 GQKVRAGAAVQVQEA 380
            Q VR G  V+V +A
Sbjct: 348 LQYVRPGVEVKVSDA 362