Pairwise Alignments

Query, 394 a.a., hemolysin D from Pseudomonas simiae WCS417

Subject, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Serratia liquefaciens MT49

 Score =  326 bits (836), Expect = 6e-94
 Identities = 179/372 (48%), Positives = 250/372 (67%), Gaps = 6/372 (1%)

Query: 15  VFLSLIVLAMLGGCSGGEPPPEAVTPKVSVISIKPQSQVLTTELAGRTQAFMVAQIRPQV 74
           V LSL+ LA   G SGG P       +V V +++ Q   L+++L GR  A M + +RPQV
Sbjct: 9   VSLSLL-LAACDGQSGGAPAGAGSVQEVGVATLQAQPVTLSSDLTGRVNATMTSDVRPQV 67

Query: 75  GGIVQRRLFVEGADVKVGQALYQLDAASYTAALAQAEASLAKYRATLKSAQATARRDAEL 134
            GI+++RLF EGA+VK GQ LYQ+D A+Y A+  QA A L    AT+KS++  A+R A L
Sbjct: 68  DGIIKKRLFTEGAEVKAGQVLYQIDPATYQASYDQAAAQLKSAEATVKSSRLKAQRYAAL 127

Query: 135 VKINAISQQDNEDAQATLLTAAADVQGAEADVQTARINLAYTRITSPVGGRIETSTVTPG 194
           VK N +S+QD +DA AT L A A V   +A +++A+INLAYT++ +P+ GRI  S+VTPG
Sbjct: 128 VKENGVSKQDADDAMATYLEAVAAVAQYQASLESAKINLAYTQVRAPISGRIGISSVTPG 187

Query: 195 ALVVANQDSALTTVQQLDPIYVDVTQSTTELLKLKRDLASGALQSNGDGQARVSLKLDDG 254
           ALV A+Q  AL T++ LDPIYVD+TQS+++LLKL++  AS  LQ   D    V++KL+DG
Sbjct: 188 ALVTASQTDALATIRALDPIYVDLTQSSSQLLKLRKQQAS--LQR--DDVTPVAIKLEDG 243

Query: 255 SAYNQQGRLKVSGVSVNEGTGTVTLRAEFANPDHLLLPGMYVRAVLEQARNEQAILVPQK 314
           + Y   G+L+++ V+V+E TG+VTLRA F NP+H LLPGMYV A ++   N + IL PQ+
Sbjct: 244 TPYTHPGKLELTEVAVDESTGSVTLRAVFPNPEHELLPGMYVHATVDNGVNPKGILAPQQ 303

Query: 315 AVNRSASGVTTALLV-VDGKVEQRELTIDRAVGNQWWVTAGLQAGDQLIVEGGQKVRAGA 373
            + R+A G  TAL+V    KVEQR +  ++ +G+ W V+ GL AGD+LIVEG  KV AG 
Sbjct: 304 GITRNAKGEATALVVNAQNKVEQRTIITEQVIGSNWLVSKGLNAGDRLIVEGTNKVAAGI 363

Query: 374 AVQVQEANAQAA 385
            V+  +     A
Sbjct: 364 EVKAVDVKQPTA 375