Pairwise Alignments

Query, 1044 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 1042 a.a., Multidrug resistance protein MexB from Pseudomonas putida KT2440

 Score = 1046 bits (2706), Expect = 0.0
 Identities = 542/1039 (52%), Positives = 731/1039 (70%), Gaps = 7/1039 (0%)

Query: 1    MAHFFIDRPIFAWVIAIVIMLGGSLSISQLPLEQYPDIAPPTVKISATYTGASAKTVEDS 60
            M  FFIDRP+FAWV+A+ I+L G+L+I QLP+ QYP++APP V+I A Y GASA T+++S
Sbjct: 1    MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPNVAPPQVEIYAVYPGASAATMDES 60

Query: 61   VTQVIEQQMKGLDNLTYMSATSSSAGSASISLTFTAGTDPDVAQMQVQNKLQQAESRLPQ 120
            V  +IEQ++ G DNL Y  +  SS GSA+I+ TF  GT PD+AQ+ VQN+L+  ESRLP+
Sbjct: 61   VVSLIEQELNGADNLLYFES-QSSLGSATITATFAPGTHPDLAQVDVQNRLKVVESRLPR 119

Query: 121  SVQSEGLTVTKGGSDFLMIVALASDDPSVTGTQIGDYISTTLLDSISRIDGVGDVQTLGS 180
             V  +GL V K  + FL++  L S+D  +  T + D ++  ++D I R+ GVG  Q  GS
Sbjct: 120  PVTQQGLQVEKVSTGFLLLATLTSEDGKLDETALSDILARNVMDEIRRLKGVGKAQLYGS 179

Query: 181  GYAMRIWLDPALLEKYALMPSDISSALEAQNTEVSAGQLGALPAIKGQQLNATISARSKL 240
              AMRIW+DP  L  + L P+D++ A+ AQN +V+ G +G LP+   Q++ A +  + +L
Sbjct: 180  ERAMRIWIDPRKLIGFNLTPNDVAEAIAAQNAQVAPGSIGDLPSRSTQEITANVVVKGQL 239

Query: 241  QTVDEFRKVVVKSNSDGAVVLLGDVATLELGSESYDISTALNGKPAAAMGVQLAAGANAL 300
             + DEF  +V+++N DG+ V +GDVA +E+G++ Y   T LNGKPA A  VQL+ GANA+
Sbjct: 240  SSPDEFAAIVLRANPDGSTVTIGDVARVEIGAQEYQYGTRLNGKPATAFSVQLSPGANAM 299

Query: 301  NVGKAVKAKLKEMEPFYPTEMQLKNVIAYDTTPFVSLSIEEVVKALGEAIVLVVLIMFLF 360
                 V+AK++++  ++P  +  K  I YDT+PFV +SIE+V+  L EA++LV  +MFLF
Sbjct: 300  ETATLVRAKMQDLARYFPEGV--KYDIPYDTSPFVKVSIEQVINTLFEAMLLVFAVMFLF 357

Query: 361  LQSLRATLIPAITVPVVLLGTFGVLALFGYSINTLTMFAMVLAIGLLVDDAIVVVENVER 420
            LQ+LR TLIP + VPV L+GTF V+   G+S+N LT+F MVLAIG+LVDDAIVVVENVER
Sbjct: 358  LQNLRYTLIPTLVVPVALMGTFAVMLAMGFSVNVLTLFGMVLAIGILVDDAIVVVENVER 417

Query: 421  LMGE-GLSPVAATRQSMREISGALVGITLVLSAVFIPMAFFGGSTGIIYRQFSVTIVSAM 479
            +M E GL P  ATR++M +ISGA+VGITLVL AVF+PMAF  GS G+IY+QFS+++  ++
Sbjct: 418  IMAEEGLPPKQATRKAMGQISGAIVGITLVLVAVFLPMAFMQGSVGVIYQQFSLSMAVSI 477

Query: 480  VLSVLVAMTLTPALCATLLKARNGKGHGAQHGFFGWFNRTFERASAGYERWVGVVLRRWG 539
            + S  +A++LTPALCATLLK      H  + GFFGWFNR FE  S GY+RWV   L+R G
Sbjct: 478  LFSAFLALSLTPALCATLLKPVAKGEHHERKGFFGWFNRRFESMSNGYQRWVVQALKRSG 537

Query: 540  RSLLLYGLVLVVMAVGYVSLATSFLPDEDQGILLAQIQLPVGATDSRTQAVIKQFEDYIL 599
            R LL+Y ++L V+  G+  L T+FLP EDQG  +  IQLP GA+  RT+ V  Q E +  
Sbjct: 538  RYLLVYAVLLAVLGYGFSQLPTAFLPTEDQGYTITDIQLPPGASRMRTEQVAAQIEAHNA 597

Query: 600  QQPEVEAMISISGLGMGGNSQNTARAFIRLKDWSERGGSGQGAAAIAQRATLALSSIGDA 659
            ++P V     I G    G+ QN A AF  LKDWSERG     A +IA RAT+A + + DA
Sbjct: 598  EEPGVGNTTLILGFSFSGSGQNAALAFTTLKDWSERGAD-DSAQSIADRATMAFTQLKDA 656

Query: 660  DAFVMQPPTVRGLGQSSGFDLQLKDLGGLGHDALVAAREQFLELARKDARLLGVRSNGLD 719
             A+ + PP + GLG+S+GF+ +L+D GG+GH  L+AAR+Q LE A K   L  VR   L 
Sbjct: 657  IAYSVLPPPIDGLGESTGFEFRLQDRGGMGHAELMAARDQLLESASKSKVLTNVREASLA 716

Query: 720  DAPQLKVSIDDRKAGALSLSTSDINSTLATALGGTYVNDFLNQGRVKKVYVQGQASSRMQ 779
            ++PQ+++ ID R+A AL +S +DI + L  A+G +YVNDF NQGR+++V VQ +   R Q
Sbjct: 717  ESPQVQLEIDRRQANALGVSFADIGTVLDVAVGSSYVNDFPNQGRMQRVVVQAEGDQRSQ 776

Query: 780  AADLDHWFVRNSNNEMVPFSSFASSTWGYGSPLLERYNGNASLEIVGDPAPGVSSGDAMA 839
              DL +  VRN + +MVP  +F  + W  G   L RYNG  ++ I G+PA G SSG+AMA
Sbjct: 777  VEDLLNIHVRNDSGKMVPLGAFVQARWVSGPVQLTRYNGYPAVSISGEPAAGYSSGEAMA 836

Query: 840  AVEAIVRQLPQGIGYEWTGQSYQLRLSGSQAPLLYGISVLFVFLCLAALYESWSVPFSVI 899
             VE +V QLP G G EWTG S Q RLSGSQAPLL  +S+L VFLCLAALYESWS+P +V+
Sbjct: 837  EVERLVAQLPAGTGLEWTGLSLQERLSGSQAPLLMALSLLVVFLCLAALYESWSIPTAVL 896

Query: 900  LVVPLGVIGAVLATRVAGLSNDVYFQVGLLTTVGLAAKNAILIVEFAKHLQEQGSSVIDA 959
            LVVPLGV+GAVLA  + G+ NDV+F+VGL+T +GL+AKNAILI+EFAKHL +QG    DA
Sbjct: 897  LVVPLGVLGAVLAVTLRGMPNDVFFKVGLITLIGLSAKNAILIIEFAKHLVDQGVDAADA 956

Query: 960  TLVAVRQRLRPILMTSLAFMFGVLPLALSTGAGSAGRQAIGTGVLGGMFSATVLGIFFVP 1019
             + A R RLRPI+MTSLAF+ GV+PLA+++GA SA +QAIGTGV+GGM SAT L + FVP
Sbjct: 957  AVQAARLRLRPIVMTSLAFILGVVPLAIASGASSASQQAIGTGVIGGMLSAT-LAVVFVP 1015

Query: 1020 LFFVLIRGRFGRVRSANQS 1038
            +FFV++    GR R A+ S
Sbjct: 1016 VFFVVVMRLSGR-RQAHDS 1033