Pairwise Alignments

Query, 1044 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 1050 a.a., Probable efflux pump membrane transporter TtgB from Pseudomonas putida KT2440

 Score = 1176 bits (3043), Expect = 0.0
 Identities = 602/1034 (58%), Positives = 769/1034 (74%), Gaps = 7/1034 (0%)

Query: 1    MAHFFIDRPIFAWVIAIVIMLGGSLSISQLPLEQYPDIAPPTVKISATYTGASAKTVEDS 60
            M+ FFIDRPIFAWVIA+VIML G+LSI +LP+ QYP IAPP + I+ TY GASA+TV+D+
Sbjct: 1    MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDT 60

Query: 61   VTQVIEQQMKGLDNLTYMSATSSSAGSASISLTFTAGTDPDVAQMQVQNKLQQAESRLPQ 120
            V QVIEQQ+ G+DNL Y+S+ S+S GS +I+ TF  GT+PD AQ+QVQNKL  A   LPQ
Sbjct: 61   VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNPDTAQVQVQNKLNLATPLLPQ 120

Query: 121  SVQSEGLTVTKGGSDFLMIVALASDDPSVTGTQIGDYISTTLLDSISRIDGVGDVQTLGS 180
             VQ +G+ VTK   +FL+++ L S+D S+T   + +YI + + D ISR  GVGD Q  G+
Sbjct: 121  EVQQQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGA 180

Query: 181  GYAMRIWLDPALLEKYALMPSDISSALEAQNTEVSAGQLGALPAIKGQQLNATISARSKL 240
             YAMRIWLDPA L K+ L P D+ +A+ AQN +VS+GQLG LPA+ G QLNATI  +++L
Sbjct: 181  QYAMRIWLDPAKLNKFQLTPVDVKTAVAAQNVQVSSGQLGGLPALPGTQLNATIIGKTRL 240

Query: 241  QTVDEFRKVVVKSNSDGAVVLLGDVATLELGSESYDISTALNGKPAAAMGVQLAAGANAL 300
            QT ++F  +++K N DG+ V LGDVA + LG E+Y +S   NGKPA+ + V+LA GANAL
Sbjct: 241  QTAEQFESILLKVNKDGSQVRLGDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANAL 300

Query: 301  NVGKAVKAKLKEMEPFYPTEMQLKNVIAYDTTPFVSLSIEEVVKALGEAIVLVVLIMFLF 360
            +  KA++  +K +EPF+P  +  K V  YDTTP V+ SI  V+  L EA+VLV L+M+LF
Sbjct: 301  DTAKALRETIKGLEPFFPPGV--KAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLF 358

Query: 361  LQSLRATLIPAITVPVVLLGTFGVLALFGYSINTLTMFAMVLAIGLLVDDAIVVVENVER 420
            LQ+ RAT+I  +TVPVVLLGTFG+LA  G+SINTLTMFAMVLAIGLLVDDAIVVVENVER
Sbjct: 359  LQNFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVER 418

Query: 421  LMGE-GLSPVAATRQSMREISGALVGITLVLSAVFIPMAFFGGSTGIIYRQFSVTIVSAM 479
            +M E GL P  AT++SM +I GALVGI LVLSAV +PMAFFGGSTG+IYRQFS+TIVSAM
Sbjct: 419  VMSEEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAM 478

Query: 480  VLSVLVAMTLTPALCATLLKA-RNGKGHGAQHGFFGWFNRTFERASAGYERWVGVVLRRW 538
             LSVLVA+  TPALCAT+LK  + G+ H A+ GFFGWFNR F+R+  GYER VG +LR  
Sbjct: 479  GLSVLVALIFTPALCATMLKPLKKGEHHTAKGGFFGWFNRNFDRSVNGYERSVGAILRNK 538

Query: 539  GRSLLLYGLVLVVMAVGYVSLATSFLPDEDQGILLAQIQLPVGATDSRTQAVIKQFEDYI 598
               LL Y L++V M   +  + T+FLP+EDQG+L AQ+Q P G++  RTQ V+ Q  +Y+
Sbjct: 539  VPFLLAYALIVVGMIWLFARIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQMREYL 598

Query: 599  LQQPE--VEAMISISGLGMGGNSQNTARAFIRLKDWSERGGSGQGAAAIAQRATLALSSI 656
            L+     V ++ +++G    G  Q++  AFI LK W ER        A+AQRA     + 
Sbjct: 599  LKDEADTVSSVFTVNGFNFAGRGQSSGMAFIMLKPWDERSKENS-VFALAQRAQQHFFTF 657

Query: 657  GDADAFVMQPPTVRGLGQSSGFDLQLKDLGGLGHDALVAAREQFLELARKDARLLGVRSN 716
             DA  F   PP V  LG ++GFD+ L+D GG+GH+ L+ AR QFL  A +   L  VR N
Sbjct: 658  RDAMVFAFAPPAVLELGNATGFDVFLQDRGGVGHEKLMEARNQFLAKAAQSKILSAVRPN 717

Query: 717  GLDDAPQLKVSIDDRKAGALSLSTSDINSTLATALGGTYVNDFLNQGRVKKVYVQGQASS 776
            GL+D PQ +++IDD +A AL ++ +DIN+TL+ ALG +YVNDF+++GRVKKVY+QG+ S+
Sbjct: 718  GLNDEPQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKVYIQGEPSA 777

Query: 777  RMQAADLDHWFVRNSNNEMVPFSSFASSTWGYGSPLLERYNGNASLEIVGDPAPGVSSGD 836
            RM   DL  W+VRN   EMVPFSSFA   W YGSP L RYNG  ++EI+G PAPG S+G+
Sbjct: 778  RMSPEDLQKWYVRNGAGEMVPFSSFAKGEWTYGSPKLSRYNGVEAMEILGAPAPGYSTGE 837

Query: 837  AMAAVEAIVRQLPQGIGYEWTGQSYQLRLSGSQAPLLYGISVLFVFLCLAALYESWSVPF 896
            AMA VE I  +LP GIG+ WTG SY+ +LSGSQ P L+ +SVLFVFLCLAALYESWS+P 
Sbjct: 838  AMAEVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPI 897

Query: 897  SVILVVPLGVIGAVLATRVAGLSNDVYFQVGLLTTVGLAAKNAILIVEFAKHLQEQGSSV 956
            +V+LVVPLG+IGA++AT + GLSNDVYF VGLLTT+GLAAKNAILIVEFAK L EQG S+
Sbjct: 898  AVVLVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGRSL 957

Query: 957  IDATLVAVRQRLRPILMTSLAFMFGVLPLALSTGAGSAGRQAIGTGVLGGMFSATVLGIF 1016
             DA + A R RLRPI+MTSLAF+ GV+PL +++GAG+  + AIGTGV+GGM SATVL IF
Sbjct: 958  YDAAIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAIGTGVIGGMISATVLAIF 1017

Query: 1017 FVPLFFVLIRGRFG 1030
            +VPLFFV +   FG
Sbjct: 1018 WVPLFFVAVSSLFG 1031