Pairwise Alignments

Query, 1044 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 1052 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Kangiella aquimarina DSM 16071

 Score =  957 bits (2473), Expect = 0.0
 Identities = 496/1049 (47%), Positives = 716/1049 (68%), Gaps = 10/1049 (0%)

Query: 1    MAHFFIDRPIFAWVIAIVIMLGGSLSISQLPLEQYPDIAPPTVKISATYTGASAKTVEDS 60
            MA FFI+RPIFAWVIA++I+LGG+L+I QLP+  YPDI+PP + ++A+Y GASA+ +ED+
Sbjct: 1    MAQFFINRPIFAWVIALLILLGGTLAIQQLPVMSYPDISPPQISVTASYPGASAQVIEDT 60

Query: 61   VTQVIEQQMKGLDNLTYMSATSSSAGSASISLTFTAGTDPDVAQMQVQNKLQQAESRLPQ 120
            VT +IE++M G++ L Y+ + SS  G+ +I+LTF  GTD D+A ++VQN+L++ E+RLP 
Sbjct: 61   VTTIIEEEMNGIEGLKYIRSESSRTGTGTINLTFDTGTDIDIAGVEVQNRLKRVEARLPS 120

Query: 121  SVQSEGLTVTKGGSDFLMIVALASDDPSVTGTQIGDYISTTLLDSISRIDGVGDVQTLGS 180
            SV+++G+ V K   DFLM+V+L S + +   T +GDY+   +L  I RIDGVG  Q  GS
Sbjct: 121  SVRTQGVAVDKARRDFLMVVSLYSPNGTFNSTDLGDYLDRAILSDIRRIDGVGSAQQFGS 180

Query: 181  GYAMRIWLDPALLEKYALMPSDISSALEAQNTEVSAGQLGALPAIKGQQLNATISARSKL 240
             YAMR+WLDP  +  Y + P+++++A+ +QN +++ G+LG+LP+   QQ+NAT+   ++L
Sbjct: 181  RYAMRVWLDPKQMAAYGITPAEVNAAVSSQNAQLATGELGSLPSPGNQQINATVLVPAQL 240

Query: 241  QTVDEFRKVVVKSNSDGAVVLLGDVATLELGSESYDISTALNGKPAAAMGVQLAAGANAL 300
             TV+EF  ++++S+S GAVV L DVAT+E G+ SY     L+G+ AAA  ++L+   NAL
Sbjct: 241  STVEEFGDIILRSSSQGAVVRLKDVATIERGANSYGSQAFLSGQDAAAFAIKLSNTGNAL 300

Query: 301  NVGKAVKAKLKEMEPFYPTEMQLKNVIAYDTTPFVSLSIEEVVKALGEAIVLVVLIMFLF 360
            +  +AVKAK++E+E F+P +M    V+ +D + FV  SI EVVK L EA+VLV ++MFLF
Sbjct: 301  DTAEAVKAKMEELEQFFPDDMAW--VVPFDASIFVDESISEVVKTLLEAVVLVTVVMFLF 358

Query: 361  LQSLRATLIPAITVPVVLLGTFGVLALFGYSINTLTMFAMVLAIGLLVDDAIVVVENVER 420
            LQS RATLIP I VP+ L+G    L LFG+SIN LTMFAMVLAIG++VDDAI+VVENV+R
Sbjct: 359  LQSWRATLIPLIVVPISLIGAGIGLQLFGFSINMLTMFAMVLAIGIVVDDAIIVVENVKR 418

Query: 421  LMGE-GLSPVAATRQSMREISGALVGITLVLSAVFIPMAFFGGSTGIIYRQFSVTIVSAM 479
            +M E GL P  AT+++M++ISGA++G T VL AVFIPMAFF GS G IY+QFS+TIV ++
Sbjct: 419  VMDEEGLKPYPATKKAMKQISGAIIGTTAVLIAVFIPMAFFSGSVGRIYQQFSLTIVISV 478

Query: 480  VLSVLVAMTLTPALCATLLKA--RNGKGHGAQH--GFFGWFNRTFERASAGYERWVGVVL 535
             +S  ++++L+PA+   LLK   R+ +G+ A+    FF WFNR FE     Y   V  + 
Sbjct: 479  AISAFLSLSLSPAIAQGLLKLEKRDAEGNKAKKEMAFFRWFNRGFESFKNFYMNSVQKMF 538

Query: 536  RRWGRSLLLYGLVLVV--MAVGYVSLATSFLPDEDQGILLAQIQLPVGATDSRTQAVIKQ 593
             + G  + +   VL+   +   ++ + T+F+P EDQG +++   LP GAT  RT  + ++
Sbjct: 539  SKKGMLITMSVFVLLCGYVVARFIYMPTAFVPSEDQGFIVSTTLLPPGATRERTLELTEK 598

Query: 594  FEDYILQQPEVEAMISISGLGMGGNSQNTARAFIRLKDWSERGGSGQGAAAIAQRATLAL 653
             + + L+QPEV  +I+++G    G+ QNTA  F+  K WSER G  + A   A  A+   
Sbjct: 599  TDAWYLEQPEVVRVITVAGFSFFGSGQNTAITFVNFKPWSEREGM-RNADEFAAAASAEF 657

Query: 654  SSIGDADAFVMQPPTVRGLGQSSGFDLQLKDLGGLGHDALVAAREQFLELARKDARLLGV 713
                + + F    P + GLG SSGFD QL++ G  G DAL AA  Q +  A++  +   V
Sbjct: 658  QKFSEGNTFAFNMPPIPGLGNSSGFDFQLQNRGTGGQDALFAAAFQIIGKAQQTGKFAEV 717

Query: 714  RSNGLDDAPQLKVSIDDRKAGALSLSTSDINSTLATALGGTYVNDFLNQGRVKKVYVQGQ 773
            R + L  AP L + +D  KA A+ +    +NSTL  ALG +YVND+++ G+V++V+VQ  
Sbjct: 718  RPDTLPAAPMLTLEVDRVKARAMGIDIPTLNSTLQIALGSSYVNDYIDNGKVRQVWVQAD 777

Query: 774  ASSRMQAADLDHWFVRNSNNEMVPFSSFASSTWGYGSPLLERYNGNASLEIVGDPAPGVS 833
            A +R    ++    +RN   ++V  S  A+++WG     L RYNG  SL + G  A GVS
Sbjct: 778  AQTRSTTEEIMSLQIRNQQGDLVNLSEIATASWGEAPAKLTRYNGLPSLPLTGSGAEGVS 837

Query: 834  SGDAMAAVEAIVRQLPQGIGYEWTGQSYQLRLSGSQAPLLYGISVLFVFLCLAALYESWS 893
            SG  M  +E    +LP GI YEW+GQS + +++G+Q  LL+ +S L VFL LAALYESWS
Sbjct: 838  SGVVMDLMEQFAAELPPGIAYEWSGQSLEEKVAGNQTALLFALSFLVVFLVLAALYESWS 897

Query: 894  VPFSVILVVPLGVIGAVLATRVAGLSNDVYFQVGLLTTVGLAAKNAILIVEFAKHLQEQG 953
            VP +V+L+VPLG++G ++   + G+ ND+YF+VGL+T +GL+AKNAILIVEFA+  Q  G
Sbjct: 898  VPMAVVLMVPLGILGCIIGMDIRGMPNDIYFKVGLITIIGLSAKNAILIVEFAREAQSDG 957

Query: 954  SSVIDATLVAVRQRLRPILMTSLAFMFGVLPLALSTGAGSAGRQAIGTGVLGGMFSATVL 1013
             S ++A + A + RLRPILMTSLAF+ GVLP+AL++GAGSA RQAIGTGV+ GMF+A V 
Sbjct: 958  KSPLEAVIEACKIRLRPILMTSLAFIMGVLPMALASGAGSASRQAIGTGVVSGMFAAAVF 1017

Query: 1014 GIFFVPLFFVLIRGRFGRVRSANQSAPTG 1042
             IFFVP+F++L+R  F R     + A  G
Sbjct: 1018 SIFFVPVFYLLVRKIFPRKLKHYEMAARG 1046