Pairwise Alignments

Query, 463 a.a., transporter from Pseudomonas simiae WCS417

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  424 bits (1090), Expect = e-123
 Identities = 228/460 (49%), Positives = 314/460 (68%), Gaps = 8/460 (1%)

Query: 8   LAAMALGGCVNLAPQYERPEAPVSEQWLPAANLPKGKVGADIK-----WQQFFTDRRLAQ 62
           + A  LGGC +L P Y+ PEAPV+ QW P          AD+      W+QFF D  L Q
Sbjct: 10  VTAFILGGC-SLIPDYQTPEAPVAAQW-PQGPAYSPTQSADVAAAEQGWRQFFHDPALQQ 67

Query: 63  LQQLALANNRDLRLASLNVEKAQAQYRIKRADLFPTVDAGVSGTHSRTPGSLSNTGTAVT 122
           L Q +L NNRDLR+A+LN++  +AQYRI+RADLFP V A  SG+  R P ++S TG +  
Sbjct: 68  LIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGESGI 127

Query: 123 THDYSAQLGLSSYELDVFGRVRNLRDEALEDYLALTETRRSTQISLVAEVATAWLTLAAD 182
           T  YSA LG+S+YELD+FGRVR+L ++ALE YL+  + RRSTQI+LVA VA A+ T  AD
Sbjct: 128 TSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQAD 187

Query: 183 NERLLLAQETLTSQLATYDLTQRSYALGGSSALSVAQAQTTVESARGDVASYESQILQDR 242
                L +ETL +   +Y+LT+RS  +G +SAL V+QA+T VE AR   + Y+  + QD 
Sbjct: 188 QALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDV 247

Query: 243 NALRLLVGSDLPEALLPGTRLESAAVLVDIPAGLPSSLLQQRPDVLSAEHTLKSANIDIG 302
           N+L +L+G+ +P  L     L+ A  L ++PAGLPS +LQ+RPD+  AEH LK+AN +IG
Sbjct: 248 NSLTVLLGTGIPADLAKPLELD-ADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANIG 306

Query: 303 AARAAFYPSISLTANAGSSSSALAGLFKSGSGAWTFAPSISVPIFDGGSNRATLDSAKVE 362
           AARAAF+PSISLTANAGS S  +  LF  G G W F P I++PIF+ GS +A+LD +K++
Sbjct: 307 AARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLDYSKIQ 366

Query: 363 REIQLQTYQQTLQTAFREVADALAVRSTLDRRIAAQQALTDASRKSFELSDALYRGGSQS 422
           ++I +  Y++T+QTAF+EV+D LA R T + ++ AQ+ L  A++  + L++  YR G  S
Sbjct: 367 KDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIGIDS 426

Query: 423 YLEALDAQRSLYSAQQDLITLRLTEQSNRITLYKVLGGGW 462
            L  LDAQR+L+SAQQ LI  RL++ ++ + LYK LGGGW
Sbjct: 427 NLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466