Pairwise Alignments

Query, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  285 bits (730), Expect = 4e-81
 Identities = 165/422 (39%), Positives = 259/422 (61%), Gaps = 21/422 (4%)

Query: 234 TRLTRLK--EAQLTTEKSQNQLEQQLDQLLGQSD-------------LLSQDQTQRRDHE 278
           T L +LK  E +   +K    +E  L   +GQ+D             +++  Q  + D E
Sbjct: 292 TNLNQLKAGEVRYDIDKEHGHIELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLE 351

Query: 279 AEQARTQTLGVTAAALLL---GVLAAWVIAGQIVTPLRKALSVANRIA--EGDLSHEVQT 333
           A Q +T   G+T A LL+   G+L  W++   I  PL++ +++ N IA  EGDL+  + +
Sbjct: 352 A-QRKTDIFGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTS 410

Query: 334 RRKDELGQLQHSMTQMTLNLRGLIGNISDNAQQIASAAEELSTITEQTRAGVSNQREETE 393
            R DELG + +      + L+G+I  +  + Q+++ ++E  + I  +T  GV  Q  E +
Sbjct: 411 DRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEID 470

Query: 394 QVAAAMNQMLATAQEVARHAEQASIAAGQANHQTDLGDQVVTDVVAQIEHLAHEMARSSQ 453
           QVA A+++M ATAQ+VAR+A QA+ AA  A+     G ++V D    I  LA E+ ++  
Sbjct: 471 QVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVS 530

Query: 454 AMLALQRESQKIGSVLDVIKSVSQQTNLLALNAAIEAARAGEAGQGFAVVADEVRSLAQR 513
            +  L ++S+ I ++L  I+ +++QTNLLALNAAIEAARAGE G+GFAVVADEVR+LAQ+
Sbjct: 531 VVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQK 590

Query: 514 TQQSAEEIEELIGGLHSGTQQVADILDYSRTLTDNSVGLARNAGDALSEIARTVLVIQEM 573
           TQ++ EEI+ +I  L  GT+ V  +++ S++ TD SV  A  A +AL  I + V VI +M
Sbjct: 591 TQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDM 650

Query: 574 NPQIAAAAEEQSAVAEEINRSVLKVRDASEQTAAASEQTAAASIELARLGTDLQQCVGQF 633
           N QIA+AAEEQSAVAE+INR+V+ +   + + A  +++++AAS +L +L    ++ + QF
Sbjct: 651 NTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQF 710

Query: 634 KV 635
           KV
Sbjct: 711 KV 712



 Score = 47.8 bits (112), Expect = 2e-09
 Identities = 88/409 (21%), Positives = 161/409 (39%), Gaps = 35/409 (8%)

Query: 11  DASVTLKLALGFSLVLALSLIIAVTGWQALAASLYRSQTLTVLAQLAVAGEELRADRILY 70
           DA  TL L L  S V+A S        Q L + L  +Q  T +  + +AG  +    +L 
Sbjct: 325 DARWTLMLQLPLSAVMADS--------QKLQSDL-EAQRKTDIFGMTIAGLLIAGIGLLV 375

Query: 71  RTLDD---ANSLNRLSASMEKIDGHLKALSNRLIAPKPIEYLQEMARIGATFNTTLKDVP 127
             L     A  L ++ A +  I      L+ RL + +      E+  I   FNT L  + 
Sbjct: 376 IWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRA----DELGAIANGFNTFLIKLQ 431

Query: 128 SLVKTRENTREELKQSSTRTGDVLAQLASDLPDQEDEKALDAVENLRQAIEQAEDRAQSP 187
            ++    ++ +++  SS  T D+  +      +Q   K +  ++ +  A+ +    AQ  
Sbjct: 432 GMITQVVSSVQKVSDSSEHTADIAIR-----TNQGVHKQMVEIDQVATAVHEMTATAQDV 486

Query: 188 AWAASSLDAYAQAVNDAERNLELAQAAVAKLPVDSTALKNAVLEIRTRLTRLKEAQLTTE 247
           A  A+     AQA + A++    A +   ++  D++    A+ E   +   + +      
Sbjct: 487 ARNATQA---AQAASHADQ----AASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDS 539

Query: 248 KSQNQLEQQLDQLLGQSDLLSQDQTQRRDHEAEQAR-TQTLGVTAAALLLGVLAAWVIAG 306
           ++ N +   +  +  Q++LL+ +         EQ R    +      L      A     
Sbjct: 540 ENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQ 599

Query: 307 QIVTPLRKALSVANRIAEGDLSHEVQTRRKDELGQLQHSMTQMTLNLRGLIGNISDNAQQ 366
            ++  L++      R+ E   S      R DE  Q      +    +   +  I+D   Q
Sbjct: 600 TMIQQLQQGTRDVVRVMEDSQS------RTDESVQHAAKAAEALETITQAVSVINDMNTQ 653

Query: 367 IASAAEELSTITEQTRAGVSNQREETEQVAAAMNQMLATAQEVARHAEQ 415
           IASAAEE S + E     V N  +   +VA   ++  A + ++ + AEQ
Sbjct: 654 IASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQ 702