Pairwise Alignments

Query, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  481 bits (1239), Expect = e-140
 Identities = 290/647 (44%), Positives = 410/647 (63%), Gaps = 12/647 (1%)

Query: 1   MLRRMTHLLGDASVTLKLALGFSLVLALSLIIAVTGWQALAASLYRSQTLTVLAQLAVAG 60
           ML  +   LG+ SV  KLALGF++VL L+L   ++GW+AL  ++ RSQ L+ +  +    
Sbjct: 1   MLGSLNRKLGNISVAAKLALGFAVVLLLTLATTISGWRALDGAIVRSQQLSEIGLINDLT 60

Query: 61  EELRADRILYRTLDDANSLNRLSASMEKIDGHLKALSNRLIAPKPIEYLQE----MARIG 116
           ++LRA+RI YR L+D  S  R+S  +++++  L  L  R    +  + L E    + R+ 
Sbjct: 61  KDLRAERITYRVLNDDASKARISNILDQLNSMLTTLQQRSNVDESRQLLTEKMALLQRLR 120

Query: 117 ATFNTTLKDVPSLVKTRENTREELKQSSTRTGDVLAQLASDLPDQEDEKA-LDAVENLRQ 175
             F+   + V S V  RE  + +    S     +  Q    +PD   +   L  ++ L +
Sbjct: 121 DNFSELQRSVASRVALREALQSQEHALSEAIDQLQTQALLKMPDDSQQSGVLGLMDTLSR 180

Query: 176 AIEQAEDRAQSPAWAASSLDAYAQ----AVNDAERNLELAQAAVAKLPVDSTALKNAVLE 231
            +E A  ++  PA+    ++ +A+    A+N A+ +L      +A L +     +   +E
Sbjct: 181 HVEGANQQSLVPAYTFVPVEDFAKVGDNALNAADSSLAQLLEGLAPLGLPRAISEQPGVE 240

Query: 232 I---RTRLTRLKEAQLTTEKSQNQLEQQLDQLLGQSDLLSQDQTQRRDHEAEQARTQTLG 288
           +   RT L + + A +  E+ QN +E   ++L   S  L + + ++RD EA  AR+    
Sbjct: 241 LSKYRTSLDQYRRAAVRVEQLQNNMEIMGNELRTVSLDLGKRKVEQRDREALAARSLLTS 300

Query: 289 VTAAALLLGVLAAWVIAGQIVTPLRKALSVANRIAEGDLSHEVQTRRKDELGQLQHSMTQ 348
           V   A+++G LAAW+I  QI  PLR+ L+VA RIA+GDLS     +R+DE+GQLQ SM +
Sbjct: 301 VALLAMVVGALAAWLITLQITQPLRQTLAVAARIAKGDLSQVDTVQRRDEMGQLQTSMRE 360

Query: 349 MTLNLRGLIGNISDNAQQIASAAEELSTITEQTRAGVSNQREETEQVAAAMNQMLATAQE 408
           MTL+LR LIG I     Q++ AA +L+  +E T+  ++ QREET+QVA AMNQM AT QE
Sbjct: 361 MTLSLRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMNQMSATVQE 420

Query: 409 VARHAEQASIAAGQANHQTDLGDQVVTDVVAQIEHLAHEMARSSQAMLALQRESQKIGSV 468
           VA++AEQAS+AA  A+ Q  +GDQVV++ + +IE LA +M     AM  L  ESQ+IGS+
Sbjct: 421 VAQNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGSI 480

Query: 469 LDVIKSVSQQTNLLALNAAIEAARAGEAGQGFAVVADEVRSLAQRTQQSAEEIEELIGGL 528
           LDVIKSVS+QTNLLALNAAIEAARAGEAG+GFAVVADEVR LAQRT  + EEI +LI  L
Sbjct: 481 LDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQLIDSL 540

Query: 529 HSGTQQVADILDYSRTLTDNSVGLARNAGDALSEIARTVLVIQEMNPQIAAAAEEQSAVA 588
           H+GT +V  +LD S++LT+ SV L+R AG ALS+I  TV  IQ MN QIA A+EEQS VA
Sbjct: 541 HNGTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATASEEQSVVA 600

Query: 589 EEINRSVLKVRDASEQTAAASEQTAAASIELARLGTDLQQCVGQFKV 635
           E+INRSV+ VRD S+QT+AASEQTAA+S EL +LG  L+  VG+F +
Sbjct: 601 EQINRSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGMVGRFSI 647