Pairwise Alignments

Query, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  466 bits (1200), Expect = e-135
 Identities = 292/647 (45%), Positives = 395/647 (61%), Gaps = 24/647 (3%)

Query: 5   MTHLLGDASVTLKLALGFSLVLALSLIIAVTGWQALAASLYRSQTLTVLAQLAVAGEELR 64
           M     + SV LKL LGF LVL L+ ++A+TGW +L + + RS  +  + QL     +LR
Sbjct: 1   MNSWFANISVNLKLGLGFGLVLVLTGLLALTGWTSLGSLIDRSNWMGDIGQLNKDLTDLR 60

Query: 65  ADRILYRTL--DDANSLNRLSASMEKIDGHLKALSNRLIAPKPIEYLQEMARIGATFNTT 122
             R+ Y     DD  + N L A ++        L+    +P+ ++ L E+    + +  +
Sbjct: 61  IARLQYMIANGDDTAAANTL-AKLDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLS 119

Query: 123 LKDVPSLVKTRENTREELKQSSTRTGDVLAQLASDLPDQEDEKAL-----DAVENLRQAI 177
           L  +          R  +  S+ R    +  L+ ++  + +  ++       +   RQ +
Sbjct: 120 LNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQL 179

Query: 178 EQ---------AEDRAQSPAWAASSLDAYAQAVNDAERNLELAQAAVAKLPVDSTALKNA 228
            Q         AE+ + +   A   LDA     ++ +R L    A + +        +NA
Sbjct: 180 LQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQF-------ENA 232

Query: 229 VLEIRTRLTRLKEAQLTTEKSQNQLEQQLDQLLGQSDLLSQDQTQRRDHEAEQARTQTLG 288
           VL  R  + + ++A      S+ ++  Q   ++ +SD L Q Q +RRD E+ QAR+    
Sbjct: 233 VLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLERRDIESTQARSLQAI 292

Query: 289 VTAAALLLGVLAAWVIAGQIVTPLRKALSVANRIAEGDLSHEVQTRRKDELGQLQHSMTQ 348
            T  ALL+GVLAA +I  QI  PL+  L    +IA GDL+  ++  R+DELG LQ  + +
Sbjct: 293 ATLLALLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELGVLQQGIAR 352

Query: 349 MTLNLRGLIGNISDNAQQIASAAEELSTITEQTRAGVSNQREETEQVAAAMNQMLATAQE 408
           M   LR LI  I D   QIASAAEELS +TEQT AG ++Q+ ET+QVA AM++M AT QE
Sbjct: 353 MGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAATVQE 412

Query: 409 VARHAEQASIAAGQANHQTDLGDQVVTDVVAQIEHLAHEMARSSQAMLALQRESQKIGSV 468
           VAR+AEQAS AA  A+ +   GD+VV + + QIE LA +M RS++AM  LQ+ESQKIGSV
Sbjct: 413 VARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQKIGSV 472

Query: 469 LDVIKSVSQQTNLLALNAAIEAARAGEAGQGFAVVADEVRSLAQRTQQSAEEIEELIGGL 528
           +DVIKSV++QTNLLALNAAIEAARAGEAG+GFAVVADEVR LAQRTQ+S EEIEELI  L
Sbjct: 473 MDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIASL 532

Query: 529 HSGTQQVADILDYSRTLTDNSVGLARNAGDALSEIARTVLVIQEMNPQIAAAAEEQSAVA 588
             GTQQVA+ +  SR LTD+SV LAR AG +L  I  TV  IQ MN QIAAAAE+QSAVA
Sbjct: 533 QHGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQQSAVA 592

Query: 589 EEINRSVLKVRDASEQTAAASEQTAAASIELARLGTDLQQCVGQFKV 635
           EEI+RS+L VRD SEQTAAAS++TAA+S+ELARLG  LQ  V QF+V
Sbjct: 593 EEISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQFRV 639