Pairwise Alignments

Query, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 646 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  344 bits (883), Expect = 6e-99
 Identities = 243/657 (36%), Positives = 354/657 (53%), Gaps = 47/657 (7%)

Query: 8   LLGDASVTLKLALGFSLVLALSLIIAVTGWQALAASLYRSQTLTVLAQLAVAGEELRADR 67
           +L +  +  KL LGF+LVL L+L +A  G  AL +   R  +L  LAQ          D 
Sbjct: 8   VLANLGMARKLGLGFALVLLLTLAVAAIGVVALQSVGQRFDSLRQLAQF-------NTDL 60

Query: 68  ILYRTLDDANSLNRLSASMEKIDGHLKALSNRLIAPKPIEYLQ-EMARIGATFNTTLKDV 126
           +  R  + A +L       + + G L+ L  R      +   Q ++A  G  F   ++  
Sbjct: 61  LRLREHEQAFALRSDMQQADALRGGLQGLVERARGLPALAAAQTDLAAYGQAFEAFVE-- 118

Query: 127 PSLVKTRENTREELKQSSTRTGDVLAQLASDLPDQEDEKALDAVENLRQAI-EQAEDRAQ 185
              V+ +E   +    S +   + L  L + L D       D V  L+Q+  +Q  +  +
Sbjct: 119 --AVQAKELALDMASWSVSNVSNNLDVLQAGLAD-------DGVYTLKQSQGQQGGEFLE 169

Query: 186 SPAWAASSLDAYAQAVNDAERNLE--------LAQAAVAKL------------PVDSTAL 225
             A  A       QA+++A   LE        ++Q  +A+              V     
Sbjct: 170 QAAQVAQVSRLMLQAMDEARVRLEKSRKGEEGVSQERIAQTVEAAGLVSQLQGAVGDAGY 229

Query: 226 KNAVLEIRTRLTRLKEA------QLTTEKS-QNQLEQQLDQLLGQSDLLSQDQTQRRDHE 278
           ++ + E+   +    E       QL  E+  + QL+   +++ G+ D     Q Q    E
Sbjct: 230 QSVLGEVAGHIGSFSEKLNEYTDQLAREQGLKAQLQASAERVTGRVDQAYLGQEQALQGE 289

Query: 279 AEQARTQTLGVTAAALLLGVLAAWVIAGQIVTPLRKALSVANRIAEGDLSHEVQTRRKDE 338
            ++        TA ALL+GVLAAW+I   +V PL+  ++ A RIA G+L  + Q  R+DE
Sbjct: 290 LQRNAIAIGLATALALLVGVLAAWLITRAVVGPLKHVIARAQRIAAGELGFDAQAPRRDE 349

Query: 339 LGQLQHSMTQMTLNLRGLIGNISDNAQQIASAAEELSTITEQTRAGVSNQREETEQVAAA 398
           +GQL  +M QM   L G++  +    +Q+A +A+ LST+TEQT   V +Q+EETEQVA A
Sbjct: 350 VGQLMQAMQQMAAGLSGIVSGLQQGIEQLAGSAQALSTVTEQTNREVGSQKEETEQVATA 409

Query: 399 MNQMLATAQEVARHAEQASIAAGQANHQTDLGDQVVTDVVAQIEHLAHEMARSSQAMLAL 458
           M QM AT  +VAR+AE+A+ AA  A+ + D G QVV   + +IE LA     +S  + +L
Sbjct: 410 MQQMTATVHDVARNAEEAAQAAQAADEKVDTGQQVVRQSMQRIEQLASAAEAASAGIDSL 469

Query: 459 QRESQKIGSVLDVIKSVSQQTNLLALNAAIEAARAGEAGQGFAVVADEVRSLAQRTQQSA 518
             E   IG VL+VIKSV++QTNLLALNAAIEAARAGE G+GFAVVADEVR+LA+RT+QS 
Sbjct: 470 SAEIHTIGDVLEVIKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTRQST 529

Query: 519 EEIEELIGGLHSGTQQVADILDYSRTLTDNSVGLARNAGDALSEIARTVLVIQEMNPQIA 578
           E+IE L+  L    QQ    +  S  L   +V  A     AL  IA  V +IQ+MN QIA
Sbjct: 530 EQIETLVASLRGNAQQSVAQIRGSTELVRLAVADALQTESALGSIAAAVSLIQQMNQQIA 589

Query: 579 AAAEEQSAVAEEINRSVLKVRDASEQTAAASEQTAAASIELARLGTDLQQCVGQFKV 635
           AAAE+QS+VAEEI+RSV ++R +++Q A A +  A +S+ELA+LGTDL+  VG F++
Sbjct: 590 AAAEQQSSVAEEISRSVTQIRGSADQAALAMQDNARSSVELAQLGTDLKGMVGHFRL 646