Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 258 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  150 bits (378), Expect = 4e-41
 Identities = 91/219 (41%), Positives = 129/219 (58%), Gaps = 15/219 (6%)

Query: 115 GPLMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIF 174
           G  + GLW T  ++V + +LG ++GLA  L RLS NP L      YV L+RGTPLLVQI 
Sbjct: 17  GVYLTGLWLTCLIAVSAMLLGCVLGLAAALLRLSKNPLLHLPVRFYVWLMRGTPLLVQIV 76

Query: 175 IFYFFI--------------GTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQN 220
             Y  +              G V+  + + A I AL L  GAY+AEI+RAG+ ++ +GQ 
Sbjct: 77  FLYTALAAGGIFRFEDIDLFGLVVPGNIQ-AAIIALGLNEGAYMAEIIRAGIGAVDKGQY 135

Query: 221 EAARSLGLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVI 280
           EA RSLG+  ++ MR +VLPQAF+ ++PPL  +F  ++K+T+LVSVI + ELL S + V 
Sbjct: 136 EAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNEFNVMLKNTTLVSVIGVQELLLSTQMVT 195

Query: 281 TTSFSPFEILFCVAGLYLLINLPLSKMASRLERRLAQSD 319
           + +F  FE+   VA  +L++          LE R  QSD
Sbjct: 196 SATFRVFELYLVVAIYFLMLTTLWGFFQRWLEARFGQSD 234