Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 245 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  132 bits (331), Expect = 1e-35
 Identities = 74/212 (34%), Positives = 120/212 (56%), Gaps = 13/212 (6%)

Query: 117 LMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIF 176
           L+ GL  T+ LS+++  L L +GL  G+ R   N   R LST+Y+   R TPLLVQ+F++
Sbjct: 25  LLRGLLWTVALSLLAWTLALGLGLIAGVSRTLPNRAARYLSTVYIHCFRNTPLLVQLFLW 84

Query: 177 YFFIGTVLNL-------------SREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAA 223
           YF +  +L L             ++    +  L+L+T A  AE VRAG++S+ R Q +AA
Sbjct: 85  YFVVPELLPLEWGNALKQMNPTTNQFLTVLVGLTLYTAAKAAEQVRAGIESVPRSQKQAA 144

Query: 224 RSLGLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTS 283
            +LGL  + + RHV+LPQA + V+PPL   F+++ K++++   I + EL    R++   S
Sbjct: 145 MALGLGTAAAYRHVILPQALRIVIPPLTSDFLNVFKNSAVALTIGLMELTGQTRQLSEFS 204

Query: 284 FSPFEILFCVAGLYLLINLPLSKMASRLERRL 315
             PFE       +Y++I   +  +   +ERR+
Sbjct: 205 AHPFEAFIAATLIYMVITYGVIVLMRHIERRV 236