Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 240 a.a., amino acid ABC transporter permease from Variovorax sp. OAS795

 Score =  134 bits (337), Expect = 2e-36
 Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 4/206 (1%)

Query: 115 GPLMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIF 174
           GPL  GL  TL L+    +L L +G+  GL R+S    LR   T +V +VRG PLL+ IF
Sbjct: 20  GPL-GGLVLTLLLASCGLVLALPLGIVLGLARVSPWRWLRWPVTGFVFVVRGLPLLMVIF 78

Query: 175 IFYFFIGTVLNLSRE--FAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQ 232
             YFF+ ++  +  +     + AL +F  AY+AEIVRAG+Q + RGQ E AR+LGL   +
Sbjct: 79  WAYFFLPSITGVKTDQFTTMLIALVVFDAAYLAEIVRAGIQGLPRGQMETARALGLGYGR 138

Query: 233 SMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFC 292
           +MR VVLPQA + +LP L  QF+S +K+TSL  +I + E+     ++ T  F+    ++ 
Sbjct: 139 AMRLVVLPQALRSMLPSLVNQFVSTIKETSLGYIIGLAEVSFIATQINTQVFTRPAQIYL 198

Query: 293 VAGL-YLLINLPLSKMASRLERRLAQ 317
           + GL Y ++   LS+ A  LERRLA+
Sbjct: 199 ILGLTYFILCFGLSRFAYWLERRLAR 224