Pairwise Alignments

Query, 788 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 575 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 66.2 bits (160), Expect = 5e-15
 Identities = 95/458 (20%), Positives = 175/458 (38%), Gaps = 70/458 (15%)

Query: 336 DITFSVEPGKRAYVNRINFRGNTKTDDKVLRREMRQMEGGWASTYLIDQSKVRLERLGYF 395
           DI    + G R  + +++F G+T  D+++L R +    G    + LI +    L+  G+F
Sbjct: 177 DIELIYDSGPRYTLGKVSFAGDTPFDEELLHRMVPFKSGTPYDSELIAELNQNLQASGFF 236

Query: 396 KEVNVETPAVTGLDDQLDVNYAVQEQASGSITASVGFAQSSGLILGGSITQNNFLGTGNS 455
           + V V+       +D + V   ++ +   ++   +GF+   G     + T++     G+S
Sbjct: 237 EGVRVDAAPAASTNDIIPVAVRLETRKPRTMGLGLGFSTDVGPRGKANWTRHWVNPQGHS 296

Query: 456 ----ASLGLTRSSYQSKYNIGFTDPYFTRDGVSLGYN--AFYNKTDYNKYYDDGVSYYAI 509
               A L   R +    Y+I    P   +   + GY      N    +K    G  +++ 
Sbjct: 297 YGWEAELSAPRQNVGLWYDIPLDPPLTDKLRFAGGYQNEEIANTDTVSKLLTLGPEWHSK 356

Query: 510 NSYGLGASLGYPINETSRLSFGLTAQHDSIEPGTYSADEIYDFIEREGKQFTNFKANLGW 569
              G    +              +   + + PG       Y ++  + +   +    L +
Sbjct: 357 LPSGWTRVISLKYQREEYRLGNDSGLSNLVMPGVS-----YSYLRSDNRIDPHNGYRLQF 411

Query: 570 SESTLNKGVLATRGHAQNLNLTVTVPGSD--LSFYKIDYTGQTFLPVSNNTALRLHTKLG 627
                 +G+                 GSD  L +      G T L  ++    R      
Sbjct: 412 DTKVAKEGL-----------------GSDTNLLYGTALVKGLTTLWDNHRFLARAQVGGS 454

Query: 628 YGNGYGSTDGLPFYESYTAGGEGTVRGFESGTLGPRSTPATGTYASAGQAYYSDRDTEAL 687
             NGY S   +P    + AGG+ +VRG+E  TL P +                DR  + +
Sbjct: 455 ATNGYKS---VPPSLRFFAGGDQSVRGYEYQTLSPEN----------------DRG-DRV 494

Query: 688 GGNILITGGAEYLFPVPFIKDNKSVRTSLFWDVGSVYSDKCYLSTTQGCGGVDLSQMASS 747
           GG  ++   AEY + +      +  R + F D G+ +++            +DL  + + 
Sbjct: 495 GGRYMVALSAEYQYSIA-----EKWRIATFIDQGNSFNN------------LDLPSLKTG 537

Query: 748 VGVGVTWYSPLGPLSVNLAYPIRTPENADKQVFQFSMG 785
           VGVG+ W SP+GP+ ++LA+ +  P         FSMG
Sbjct: 538 VGVGIRWVSPVGPIRLDLAHALEDPGGIR---LHFSMG 572



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 14/173 (8%)

Query: 132 GLRNELQRQYVAQGRYSASVDTEVVPQPRNRVGLKIKIDEGEVASIQHINVVGNTVFADA 191
           G   + ++   A G Y   ++++V  +  N   L + ID GE   ++++ +    V   A
Sbjct: 62  GAEEQARKAAQALGFYQPRIESDV--KGGNNPRLILTIDPGEPVHLRNVTI---RVDGPA 116

Query: 192 ALLDQFTLKTSNWLSF--FRNDDKYAREKLSGDLERLRSFYLDR-GYINMDIASTQVSMT 248
           A L  F +  SN L      N   Y       D +RL      R G+ +      ++++ 
Sbjct: 117 ADLKAFRVPVSNDLKSGAVLNHGHYE------DAKRLIQNQASRYGFFSGRFTRQKLAVD 170

Query: 249 PDKKHVYITVNIQEGQKYTVRDVKLSGELKVPQDQVQALLLVKKGQVFSRKLM 301
           P      I +    G +YT+  V  +G+    ++ +  ++  K G  +  +L+
Sbjct: 171 PQAGVADIELIYDSGPRYTLGKVSFAGDTPFDEELLHRMVPFKSGTPYDSELI 223