Pairwise Alignments

Query, 788 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 795 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 1176 bits (3042), Expect = 0.0
 Identities = 587/793 (74%), Positives = 678/793 (85%), Gaps = 12/793 (1%)

Query: 6   LLCSVALLLNASLALAQGFKISDIRINGLQRVSAGSVFGALPLNVGDEADDRRLVDSTRA 65
           LL +V  +L  +   A+ F ISDIR+NGLQRVSAGSVFGALPLNVG++ADDRRLV+STRA
Sbjct: 5   LLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVESTRA 64

Query: 66  LFKTGYFQDIQLSREGDVLIINVVERPSVASIEFEGNKAIATDDLMKGMKQSGLSESEIF 125
           LFKTG+FQDIQL REG+VL+I VVERPSVASIE EGNKAI+T+DLMKG+KQSGL+E EIF
Sbjct: 65  LFKTGFFQDIQLGREGNVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIF 124

Query: 126 QRATLEGLRNELQRQYVAQGRYSASVDTEVVPQPRNRVGLKIKIDEGEVASIQHINVVGN 185
           QRATLEG+RNELQRQYVAQGRYSA+V+TEVVPQPRNRVGLK+ I+EG VA+IQHINVVGN
Sbjct: 125 QRATLEGVRNELQRQYVAQGRYSATVETEVVPQPRNRVGLKVNINEGTVAAIQHINVVGN 184

Query: 186 TVFADAALLDQFTLKTSNWLSFFRNDDKYAREKLSGDLERLRSFYLDRGYINMDIASTQV 245
           T FAD  L+D F LKT+NWLSFF+NDDKYAREKLSGDLERLRS+YLDRGYINMDIASTQV
Sbjct: 185 TKFADEDLIDLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIASTQV 244

Query: 246 SMTPDKKHVYITVNIQEGQKYTVRDVKLSGELKVPQDQVQALLLVKKGQVFSRKLMTTTS 305
           S+TPDKKHVYITVN+ EG+KY VRDVKLSG+LKVP+DQV+ALLLV+K QVFSRKLMTTTS
Sbjct: 245 SITPDKKHVYITVNVNEGEKYKVRDVKLSGDLKVPEDQVKALLLVQKDQVFSRKLMTTTS 304

Query: 306 DLITRRLGNDGYTFANVSGTPQVHEADHTVDITFSVEPGKRAYVNRINFRGNTKTDDKVL 365
           +LITRRLGN+GYTFANV+G P  H+ DHTVDITF V+PGKRAYVNRINFRGNTK+ D+VL
Sbjct: 305 ELITRRLGNEGYTFANVNGVPTPHDDDHTVDITFVVDPGKRAYVNRINFRGNTKSADEVL 364

Query: 366 RREMRQMEGGWASTYLIDQSKVRLERLGYFKEVNVETPAVTGLDDQLDVNYAVQEQASGS 425
           RREMRQMEGGWASTYLIDQSK RLERLG+FKEVNVETPAV G+DDQ+DVNYAV+EQASGS
Sbjct: 365 RREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPAVPGVDDQVDVNYAVEEQASGS 424

Query: 426 ITASVGFAQSSGLILGGSITQNNFLGTGNSASLGLTRSSYQSKYNIGFTDPYFTRDGVSL 485
           ITASVGFAQS+GLILGGSITQNNFLGTGN  S+GLTRS YQS+YN G+TDPY+T DGVSL
Sbjct: 425 ITASVGFAQSAGLILGGSITQNNFLGTGNRVSIGLTRSEYQSRYNFGYTDPYWTADGVSL 484

Query: 486 GYNAFYNKTDYNKYYDDGVSYYAINSYGLGASLGYPINETSRLSFGLTAQHDSIEPGTYS 545
           GYNAFY  TDY K  D  V+ YAI+S G G ++GYPI+ETSRL+FGLTAQ D I+ G Y+
Sbjct: 485 GYNAFYRTTDY-KDLDVDVASYAIDSLGAGVNVGYPISETSRLTFGLTAQQDEIKTGVYT 543

Query: 546 ADEIYDFIEREGKQFTNFKANLGWSESTLNKGVLATRGHAQNLNLTVTVPGSDLSFYKID 605
            DEI+DF  REG +F NFKA+ GWSESTLNKGVLATRGH+Q+L L  T PGSDLSF+K+D
Sbjct: 544 VDEIFDFTRREGDKFLNFKASAGWSESTLNKGVLATRGHSQSLTLETTTPGSDLSFFKLD 603

Query: 606 YTGQTFLPVSNNTALRLHTKLGYGNGYGSTDGLPFYESYTAGGEGTVRGFESGTLGPRST 665
           Y GQ F P+S+N  +RLHT+LGYG+GYGST+GLPFYE+Y AGG  +VRGF+  TLGPR T
Sbjct: 604 YRGQLFTPLSDNYTMRLHTELGYGDGYGSTNGLPFYENYYAGGFNSVRGFKDSTLGPRGT 663

Query: 666 PATGTYASAGQAYYSDRDTEAL--GGNILITGGAEYLFPVPFIKDNKSVRTSLFWDVGSV 723
           P+ G   +  Q   +D D + L  GGN+LI GGAE LFP+PF+KD +S+RTS+FWDVG+V
Sbjct: 664 PSRGVGVTGNQGTVADSDNDPLPFGGNVLIQGGAEILFPLPFVKDQRSLRTSVFWDVGNV 723

Query: 724 YSDKC--------YLSTTQGCGGVDLSQMASSVGVGVTWYSPLGPLSVNLAYPIRTPENA 775
           +  KC          S TQ C  V LS +ASSVGVGVTW + LGPLS  LA PI+ P+NA
Sbjct: 724 FDSKCEQIKNPSGVKSNTQ-CNDVSLSNLASSVGVGVTWVTALGPLSFALAMPIKKPDNA 782

Query: 776 DKQVFQFSMGQTF 788
           + Q+FQFS+GQTF
Sbjct: 783 ETQIFQFSLGQTF 795