Pairwise Alignments

Query, 788 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 583 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score = 55.8 bits (133), Expect = 6e-12
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 34/134 (25%)

Query: 633 GSTDGLPFYESYTAGGEGTVRGFESGTLGPRSTPATGTYASAGQAYYSDRDTEALGGNIL 692
           G  + +P    + AGG+ +VRG++  TL P+++                 D + +GG  L
Sbjct: 465 GFKNNIPPSLRFFAGGDQSVRGYDYQTLSPKNS-----------------DGDRIGGRYL 507

Query: 693 ITGGAEYLFPVPFIKDNKSVRTSLFWDVGSVYSDKCYLSTTQGCGGVDLSQMASSVGVGV 752
           + G  EY + +      +  R + F D G+ ++D            ++L  + + VG GV
Sbjct: 508 VAGSVEYQYSL-----TEKWRVATFVDQGNSFND------------LELPSLKTGVGFGV 550

Query: 753 TWYSPLGPLSVNLA 766
            W SP+GPL ++LA
Sbjct: 551 RWVSPVGPLRLDLA 564



 Score = 41.6 bits (96), Expect = 1e-07
 Identities = 44/224 (19%), Positives = 92/224 (41%), Gaps = 10/224 (4%)

Query: 221 GDLERLRSFYLDRGYINMDIASTQVSMTPDKKHV-YITVNIQEGQKYTVRDVKLSGELKV 279
           G  E+ R      GY    I  T+V    D  H   + ++I  G+   +R+V +   ++ 
Sbjct: 65  GAEEQARKAAQALGYYQAQI-DTEVKPASDADHPPKLIISINPGEPIRLRNVTV--RIEG 121

Query: 280 PQDQVQALLL-----VKKGQVFSRKLMTTTSDLITRRLGNDGYTFANVSGTPQVHEADHT 334
           P  +++A  +     ++ G+  +         LI  +    G+     S      +    
Sbjct: 122 PASEMKAFRVPDSKALRPGEQLNHGHYEDAKRLIQNQASRYGFFSGRFSSQRLAVDPQAG 181

Query: 335 V-DITFSVEPGKRAYVNRINFRGNTKTDDKVLRREMRQMEGGWASTYLIDQSKVRLERLG 393
           V DI    + G R  +  + F G+T  D+ +L+R +    G    + L+ +    L+  G
Sbjct: 182 VADIELVYQSGPRYRLGAVTFGGDTPLDEDLLQRMVSFKPGTPYDSELVAELNNDLQSSG 241

Query: 394 YFKEVNVETPAVTGLDDQLDVNYAVQEQASGSITASVGFAQSSG 437
           YF+ V V+      + +++ V+  ++ +   ++   +GF+   G
Sbjct: 242 YFEGVRVDAAPTAAVGEEVPVDVHLETRKPRTMGLGLGFSTDVG 285



 Score = 36.6 bits (83), Expect = 4e-06
 Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 8/172 (4%)

Query: 132 GLRNELQRQYVAQGRYSASVDTEVVP--QPRNRVGLKIKIDEGEVASIQHINVVGNTVFA 189
           G   + ++   A G Y A +DTEV P     +   L I I+ GE   ++++ V    +  
Sbjct: 65  GAEEQARKAAQALGYYQAQIDTEVKPASDADHPPKLIISINPGEPIRLRNVTV---RIEG 121

Query: 190 DAALLDQFTLKTSNWLSFFRNDDKYAREKLSGDLERLRSFYLDRGYINMDIASTQVSMTP 249
            A+ +  F +  S  L      +    E     ++   S Y   G+ +   +S ++++ P
Sbjct: 122 PASEMKAFRVPDSKALRPGEQLNHGHYEDAKRLIQNQASRY---GFFSGRFSSQRLAVDP 178

Query: 250 DKKHVYITVNIQEGQKYTVRDVKLSGELKVPQDQVQALLLVKKGQVFSRKLM 301
                 I +  Q G +Y +  V   G+  + +D +Q ++  K G  +  +L+
Sbjct: 179 QAGVADIELVYQSGPRYRLGAVTFGGDTPLDEDLLQRMVSFKPGTPYDSELV 230