Pairwise Alignments

Query, 788 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 805 a.a., outer membrane protein assembly factor BamA from Dickeya dianthicola ME23

 Score =  573 bits (1478), Expect = e-167
 Identities = 328/812 (40%), Positives = 472/812 (58%), Gaps = 31/812 (3%)

Query: 1   MNFSRLLCSVALLLNASLALAQGFKISDIRINGLQRVSAGSVFGALPLNVGDEADDRRLV 60
           M   +LL +  L  +A++  A GF + DI   GLQRV+ G+   ++P+ VGD   D  + 
Sbjct: 1   MAMKKLLIASLLFSSATVYGADGFVVKDIHFEGLQRVAVGAALLSMPVRVGDAVTDEDIG 60

Query: 61  DSTRALFKTGYFQDIQLSREGDVLIINVVERPSVASIEFEGNKAIATDDLMKGMKQSGLS 120
           +  RALF TG F+D+++ R+GD L+I V ERP++AS+ F GNKA+  + L + ++ SG+ 
Sbjct: 61  NIIRALFATGNFEDVRVLRDGDSLLIQVKERPTIASLTFSGNKAVKEEMLKENLEASGVR 120

Query: 121 ESEIFQRATLEGLRNELQRQYVAQGRYSASVDTEVVPQPRNRVGLKIKIDEGEVASIQHI 180
             E   R TL  +   L+  Y + G+YSA+V   V P PRNRV LK+   EG  A IQ I
Sbjct: 121 VGEALDRTTLSNIEKGLEDFYYSVGKYSATVKAVVTPLPRNRVDLKLVFTEGVSAKIQQI 180

Query: 181 NVVGNTVFADAALLDQFTLKTS-NWLSFFRNDDKYAREKLSGDLERLRSFYLDRGYINMD 239
           N+VGN  F+   L+ +F L+    W +    D KY ++KLSGDLE LRSFYLDRGY   +
Sbjct: 181 NIVGNKSFSSDELISRFQLRDEVPWWNVV-GDRKYEKQKLSGDLETLRSFYLDRGYARFN 239

Query: 240 IASTQVSMTPDKKHVYITVNIQEGQKYTVRDVKLSGELKVPQDQVQALLLVKKGQVFSRK 299
           I STQVS+TPDKK +YIT+N+ EG +Y +  V + G L     +++ L  V+ G++++  
Sbjct: 240 IDSTQVSLTPDKKGIYITINVTEGNQYKLSGVVVRGNLVGHATEIEDLTRVQPGELYNGT 299

Query: 300 LMTTTSDLITRRLGNDGYTFANVSGTPQVHEADHTVDITFSVEPGKRAYVNRINFRGNTK 359
            +T   + I + LG  GY +  V   P++++ D TV ++ +V+ G R  V RI F GN  
Sbjct: 300 KVTRMEEDIKKLLGRYGYAYPRVVTQPEINDTDKTVRLSINVDAGNRFTVRRIRFDGNDV 359

Query: 360 TDDKVLRREMRQMEGGWASTYLIDQSKVRLERLGYFKEVNVETPAVTGLDDQLDVNYAVQ 419
           + D VLRREMRQMEGGW    L+ Q K RL RLGYF+ V+VET  V G  DQ+DV Y V+
Sbjct: 360 SKDDVLRREMRQMEGGWLGNDLVQQGKERLNRLGYFESVDVETQRVPGTPDQVDVVYKVK 419

Query: 420 EQASGSITASVGFAQSSGLILGGSITQNNFLGTGNSASLGLTRSSYQSKYNIGFTDPYFT 479
           E+ +GS+   VGF   SG+     + Q+N+LGTGNS  +  TR+ YQ+   +  TDPYFT
Sbjct: 420 ERNTGSLNFGVGFGTESGISFQAGVQQDNWLGTGNSVGISGTRNDYQTYVELSMTDPYFT 479

Query: 480 RDGVSLGYNAFYNKTDYNKYYDDGVSYYAINSYGLGASLGYPINETSRLSFGLTAQHDSI 539
            DGVSLG   FYN     K  D  +S Y   SYG G +LG+PINE + L  G+   H+S+
Sbjct: 480 VDGVSLGGRIFYNNF---KALDADLSDYTNQSYGAGTTLGFPINENNSLRVGVDYVHNSL 536

Query: 540 EPGTYSADEIYDFIEREG-------KQFTNFKAN-----LGWSESTLNKGVLATRGHAQN 587
                    ++ ++ + G           +F AN      GW+ + L++G   T G+  N
Sbjct: 537 SDMKPQV-AMWRYLNKAGVDPDPSTTSSVSFDANDFFLTSGWTYNNLDRGYFPTAGNRAN 595

Query: 588 LNLTVTVPGSDLSFYKIDYTGQTFLPVS--NNTALRLHTKLGYGNGYGSTDGLPFYESYT 645
           LN  VTVPGSD  +YK+ +   ++ P+S  +N  L   TK GY +G    + +PFY+++ 
Sbjct: 596 LNSKVTVPGSDNEYYKLTFDSASYFPLSENHNWVLMARTKAGYADGLSGKE-VPFYDNFF 654

Query: 646 AGGEGTVRGFESGTLGPRSTPATGTYASAGQAYYSD--RDTEALGGNILITGGAEYLFPV 703
           AGG  +VRGF S T+GP++   TG   ++  +   D  +  +A+GGN +    AE + P 
Sbjct: 655 AGGSSSVRGFRSNTIGPKAAYYTGCSTTSVSSCSIDPTKMRDAVGGNAMAAASAELIVPT 714

Query: 704 PFIKD--NKSVRTSLFWDVGSVYSDKCYLSTTQ--GCGGVDLS---QMASSVGVGVTWYS 756
           PFI D  + SVRTS F D G+V+ D  + +T Q    G  D S    +  S G+ V W S
Sbjct: 715 PFISDKYSSSVRTSFFVDAGTVW-DTHWENTAQTLAAGVPDYSTPGNIRMSSGLAVQWMS 773

Query: 757 PLGPLSVNLAYPIRTPENADKQVFQFSMGQTF 788
           PLGPL  + A P +  E    + FQF++G+T+
Sbjct: 774 PLGPLVFSYAQPFKKYEGDRSEQFQFNIGKTW 805