Pairwise Alignments

Query, 788 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 904 a.a., Outer membrane protein/protective antigen OMA87 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  136 bits (343), Expect = 4e-36
 Identities = 167/776 (21%), Positives = 314/776 (40%), Gaps = 136/776 (17%)

Query: 13  LLNASLALAQGFKISDIRINGLQRVSAGSVFGALPLNVGDEAD--DRRLVDSTRALFKTG 70
           +L  + A  + +KI++I+  GL  +   ++     L VGDE       + ++ + L++ G
Sbjct: 41  ILELNYAQPKQYKIAEIKAVGLSTLDETAIVSLSGLKVGDEISVPGDAISNALKKLWQQG 100

Query: 71  YFQDIQL---SREGD--VLIINVVERPSVASIEFEGNKAIATDDLMKGMKQSGLSESEIF 125
              D+++     EGD   L++++ ERP  + +EF G  +    +L   ++  G     + 
Sbjct: 101 IIGDVKILVTKIEGDEIYLLMDLTERPRFSIVEFTGVTSTQESELRDKVQIRG----RVV 156

Query: 126 QRATLEGLRNELQRQYVAQGRYSASVDTEVVPQPR-----NRVGLKIKIDEGEVASIQHI 180
           +   L   + ++   +V +G  +  V    + Q R     N V L+  +D+     I  I
Sbjct: 157 REDVLNSSKRKITNYFVEKGYLNTEVK---IIQERDTSFPNSVKLRFDVDKKSKVKINEI 213

Query: 181 NVVGNTVFADAALLDQF------------------------------------------- 197
            + GN   AD  L  +                                            
Sbjct: 214 AITGNEEIADGKLKKKMKKTNEHARVWIFKDIFERLKNADAEHIGNSIARRNPVTDEEVK 273

Query: 198 TLKTSNWLSFFRNDDKYAREKLSGDLERLRSFYLDRGYINMDIASTQVSMTPDKKHVYIT 257
           T    N+   F +  K+ +++   D + + +FY  +G+ + +I    V    D++ V I 
Sbjct: 274 TYINKNFKLNFFSSSKFNKKEYRNDKDNIINFYQTKGFRDAEILVDSV-YNFDERTVNID 332

Query: 258 VNIQEGQKYTVRDVKLSGELKVPQDQVQALLLVKKGQVFSRKLMT-------TTSDLITR 310
           ++++EG+KY  RD+  +G       ++ A L +K G  ++++L+        T  D I+ 
Sbjct: 333 IDLEEGRKYYYRDISFTGNYIHDDAELLAKLGIKSGDTYNKELLDKRLNYDPTKGDDISS 392

Query: 311 RLGNDGYTFANVSGTPQVHEADHTVDITFSVEPGKRAYVNRINFRGNTKTDDKVLRREMR 370
              +DGY F  +    +V+ A  ++DI   +  G +  VN ++  GN +T D V+ RE+R
Sbjct: 393 LYQDDGYLFFQIDPV-EVNVAADSIDIEMRIFEGPQVTVNSVSIEGNERTSDHVVMREIR 451

Query: 371 QMEGGWASTYLIDQSKVRLERLGYFKEVNVETPAVTGLDD-QLDVNYAVQEQASGSITAS 429
            + G      L+ ++   L ++GYF    +        +D  +D+ + ++E+ +  I  S
Sbjct: 452 ILPGQKFDRSLLVRTIRELSQIGYFDPETINPDLRPNFEDATVDIVFQLEERPNDQIELS 511

Query: 430 VGFAQSSGLILGGSITQNNF---------------LGTGNSASLGLTRS--SYQSKYNIG 472
            G+    G +    +  NNF               +G G   SL +  +  S+Q+ Y+  
Sbjct: 512 GGWGGFYGFVGTVGLVFNNFSVRNIGDFSKWRPLPVGDGQKLSLRVQANGKSFQN-YSFS 570

Query: 473 FTDPYF-----TRDGVSLGYNAFYNKTDYNK-YYDDGVSYYAIN--SYGLGASLGYPINE 524
           FT+P+F         VSL ++       YN+  + D + ++ I   + GL   + +P   
Sbjct: 571 FTEPWFGGKKPNALSVSLNHSVQRRIDIYNQSNFGDELGFFKITGITVGLAKRVTWP--- 627

Query: 525 TSRLSFGLTAQHDSIEPGTYSADEIYDFIEREGKQFTNFKANLGWSE----------STL 574
               S   + Q+   E   Y       F   + K F  F   +  S           S +
Sbjct: 628 DDYFSISNSLQYQVYEFDQYGTSFGLSFPTGKLKSFV-FNTTVSRSNVDSPIYPRMGSNI 686

Query: 575 NKGVLATRGHAQ-NLNLTVTVPGSD----LSFYKIDYTGQTFLPV--SNNTALRLHTKLG 627
           + GV  T  +A  N N+T   P  +    L ++K  +  + + P+  SN   +   T +G
Sbjct: 687 SLGVNFTPPYASLNKNITEDSPDQEKYRWLEYHKWMFDAKFYTPIFGSNKFVVSARTHMG 746

Query: 628 YGNGYGSTDGLPFYESYTAGGEGT-------------VRGFESGTLGP----RSTP 666
           +   Y    G+   E +  GG+G              +RG+E+  L P    R TP
Sbjct: 747 FLGSYSKKVGMIPVERFVMGGDGMTFNNFSLGQDIIGLRGYENQVLTPGYYSRGTP 802