Pairwise Alignments

Query, 222 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 231 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 2e-23
 Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 10/212 (4%)

Query: 20  YNFLLDAICVGRYRKGDRLIAEDIASEIGMSRMPVREAFRRLDAQGLVTLRPNRGAVVSG 79
           Y  L   I  G ++ G++L+   +     +   P+REA  +L A+ LV     +G  V+ 
Sbjct: 15  YERLKKDIIRGVFKPGEKLLMSTLKERYDLGVGPLREALSQLVAEHLVNAISQKGYRVAP 74

Query: 80  LDIDELHEVFEMRSALEGLAVRVAVPR---IGERQLAALERMLDEMDDYRDESA---AWV 133
           + +DE++++++ R+ LE + + +A+ R     E  + A    L ++ + +        W 
Sbjct: 75  MSLDEMNDIYDARANLEAMIIALAIERGDDAWEASVLAHSHTLAKVVEVKTREQRLDVWD 134

Query: 134 SRHRAFHEYLCSLSGRPRLMKQISALYSLVEAPMRLWLQH---GEKPLS-ARQEHAVILD 189
            RH+AFH  + S  G   L++  + L+   E    LWL      E+ L+  RQEHA +++
Sbjct: 135 ERHKAFHTAIASGCGSKHLLQARTYLFDQAERYRHLWLTQTVFSEEALALKRQEHAALVE 194

Query: 190 AIRAGDAARAEGVVREHIEGTVPALIQFLQAE 221
            I A DA  A  ++R H+   VP + Q + AE
Sbjct: 195 VILARDAKTASAMMRSHLMTPVPIIAQIMHAE 226