Pairwise Alignments

Query, 258 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  147 bits (370), Expect = 3e-40
 Identities = 90/220 (40%), Positives = 126/220 (57%), Gaps = 15/220 (6%)

Query: 16  SGVYLTGLWLTCLIAVSAMLLGCVLGLAAALLRLSKNPLLHLPVRFYVWLMRGTPLLVQI 75
           +G    GLW T  I+V +  LG V+GL A L RLS NP L      YV L+RGTPLLVQI
Sbjct: 115 AGPLAWGLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQI 174

Query: 76  VFLYTALAAGGIFRFEDIDLFGLVVPGNIQ-AAIIALGLNEGAYMAEIIRAGIGAVDKGQ 134
              Y  +              G V+  + + A + AL L  GAY+AEI+RAG+ ++ KGQ
Sbjct: 175 FIFYFFI--------------GTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQ 220

Query: 135 YEAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNEFNVMLKNTTLVSVIGVQELLLSTQMV 194
            EA RSLG+   + MR ++LPQAF+ ++PPL  +F  ++K+T+LVSVI + EL  S +  
Sbjct: 221 NEAARSLGLNAGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREA 280

Query: 195 TSATFRVFELYLVVAIYFLMLTTLWGFFQRWLEARFGQSD 234
            + +F  FE++  VA  +L++          LE R  QSD
Sbjct: 281 ITTSFSTFEIWFCVAGLYLLINLPLSHIASRLERRLAQSD 320