Pairwise Alignments

Query, 563 a.a., general secretion pathway protein GspE from Pseudomonas simiae WCS417

Subject, 463 a.a., General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) from Variovorax sp. SCN45

 Score =  369 bits (946), Expect = e-106
 Identities = 210/440 (47%), Positives = 279/440 (63%), Gaps = 28/440 (6%)

Query: 126 YACQVPVWLAIGPRNEVDTLIERYYGQGRSAMGTLIENLDEQGGAEE------DIEHLKD 179
           Y  Q    LA GP  +    I   Y QG S+   ++  +               +E L  
Sbjct: 45  YGVQTFEVLADGPLAQ---RISAAYAQGESSAAAVVSEVQNDADLSRMMQELPAVEDLLA 101

Query: 180 MASEAPVIRLVNLILQRAVEQRASDIHIEPFENQLKVRYRIDGVLHDAEAPPASSSAAVI 239
            A +AP+IR++N +L +A    ASDIHIEP+E    VR+RIDG L +   P  +  AA+I
Sbjct: 102 SAGDAPIIRMLNALLTQAARDGASDIHIEPYERTSSVRFRIDGTLREVVQPNRALHAALI 161

Query: 240 SRVKIMARLDIAERRLPQDGRIMLRIQGKELDLRVSTVPTSFGESVVLRLLDRQTVQFDF 299
           SR+KIMA LDI+E+RLPQDGRI LRI  + +D+RVST+P++ GE  VLRLLD+   +   
Sbjct: 162 SRLKIMADLDISEKRLPQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLTL 221

Query: 300 PSLGFDGQRLASFLDLLERPHGILLVTGPTGSGKTTTLYTALSRLNTTERKIITVEDPVE 359
            S+G  G  L  F  L+ +PHGI+LVTGPTGSGKTTTLY AL+RL+ +   I+TVEDP+E
Sbjct: 222 ESVGMQGDTLDRFEKLISQPHGIILVTGPTGSGKTTTLYAALARLDASRSNIMTVEDPIE 281

Query: 360 YQLEGINQIQVKPAIGLDFAGALRSIVRQDPDVIMIGEIRDLETCRIAIQSSLTGHLVLS 419
           Y+L G+ Q Q+   I L FA ALR+I+RQDPDVIMIGEIRD ET +IAIQ+SLTGHLVL+
Sbjct: 282 YELPGVGQTQINAKIELTFAKALRAILRQDPDVIMIGEIRDFETAQIAIQASLTGHLVLA 341

Query: 420 TLHTNSAAASITRLMDMGVESYLIASTVSGILAQRLVRRLDPVTRVAFEAPPELIAEHGL 479
           TLHTN + +++TRL DMGVE +L++S++ G+LAQRLVR+   V      A  E+  + G 
Sbjct: 342 TLHTNDSVSAVTRLTDMGVEPFLLSSSLLGVLAQRLVRK---VCTACAGAGCEVCGQTG- 397

Query: 480 DRLTEQRPILLYRGDYHGRSALTELLVMNDELRSLLMRHADAATLEQAARRAGLRTLYEE 539
                          Y GR+ + ELLV ++ ++ L+   A  + L QA  R GLR + E+
Sbjct: 398 ---------------YQGRTGIFELLVADETVQGLIHSKAAESELLQAGARGGLRLMRED 442

Query: 540 GLRQALAGITSLEEVLRVTR 559
           G R   AGITS  E+LRVTR
Sbjct: 443 GERLVQAGITSRAELLRVTR 462