Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 412 a.a., General secretion pathway protein F / Type II secretory pathway, component PulF from Variovorax sp. SCN45

 Score =  199 bits (507), Expect = 9e-56
 Identities = 133/408 (32%), Positives = 205/408 (50%), Gaps = 15/408 (3%)

Query: 1   MSLFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQIEAAGSPLLRNPRGQLKG- 59
           M  + F A+D+ G  + G LEA    +A + L  + L+ L ++  GS  + N  GQ  G 
Sbjct: 1   MPAYSFEAIDASGQSREGVLEADTARSARSLLRAQALIPLSVKPVGSDHV-NGTGQRSGL 59

Query: 60  -------------AALVSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHV 106
                          L  +T+QLA L+ +G PLER+L+ L  +      R L+  +R  V
Sbjct: 60  GRWLGGGKRVFNSTGLAVWTRQLAGLVSSGLPLERALTALTDEAESEPQRNLVASLRAEV 119

Query: 107 KAGKPLSAALEEEGGSFSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALI 166
            AG P + AL      FSP+Y +++ AGE  G L   L +L+D LE  + L+ ++I A +
Sbjct: 120 NAGSPFARALSAHSREFSPIYTAVIGAGEQSGNLGLVLDRLADDLEERQALQQKLIGAAL 179

Query: 167 YPAFLVVGVLGSLALLLAYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYGLLVLAGL 226
           YPA + +  +  +  L++YVVPQ   +F      +P++T V+L+L   +  YG  +L  +
Sbjct: 180 YPAIVTLVAIVIVIFLVSYVVPQVAQVFAGTKRSLPFLTTVMLSLSAGVRNYGWWMLGAV 239

Query: 227 IVSGGCWAARLRNPAFREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQAL 286
           ++        L   AFR ++D   L +  +G L +   AAR   TL  L + GV +L+AL
Sbjct: 240 VLGAIGARLALAQEAFRLKFDAAWLKLPLVGKLARGYNAARFASTLAMLATAGVPILRAL 299

Query: 287 VIARQVCTNRALQAQVGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSML 346
             A +   NRA++A    A   V+ G  LASA   +   P L      +GEQ G L  ML
Sbjct: 300 QAASETLGNRAMRADALDALVLVREGAPLASALAQKKRFPGLVSMFARLGEQTGTLPLML 359

Query: 347 LKVADIFDVEAKRGIDRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSL 394
            + A+    E +R    L   L P L V M  +V +I+LA+MLP++ L
Sbjct: 360 QRAANQLGAEVQRRAMHLATILEPLLIVAMGGVVMLIVLAVMLPIIQL 407