Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 401 a.a., General secretion pathway protein F from Variovorax sp. SCN45

 Score =  193 bits (491), Expect = 6e-54
 Identities = 137/401 (34%), Positives = 206/401 (51%), Gaps = 4/401 (0%)

Query: 1   MSLFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQI--EAAGSPLLRNPRGQLK 58
           M+ F++ A  + G  Q GT E     +  A L  RGL  L I  +AAG   L     +L 
Sbjct: 1   MARFEYEAASASGELQRGTTEGESARSVRAQLRDRGLTPLDIREKAAGGGALSWLSPRLG 60

Query: 59  GAALVSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPLSAALEE 118
            A L   T++LA+LLGA   LE +L   ++Q  +  V   +  + D V+AG  L+ AL E
Sbjct: 61  AADLCWATRELASLLGARLTLEAALVATIEQAERKHVAESLSAVCDSVRAGMRLADALGE 120

Query: 119 EGGSFSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLVVGVLGS 178
               F  +Y ++V AGE  G L   + +L+DYLE  + LRG+V+ A IYPA +    L  
Sbjct: 121 RPRDFPQIYRALVSAGEDSGDLARVMERLADYLENRDNLRGKVLTAFIYPAIVGFVSLCI 180

Query: 179 LALLLAYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYGLLVLAGLIVSGGCWA-ARL 237
           +  LL YVVPQ +  F      +P IT V+LA   F+  +G L  AG++V+    A A L
Sbjct: 181 VVFLLGYVVPQVIGAFAQARQELPTITRVMLAASAFVREWGWLT-AGVVVAAWVAARALL 239

Query: 238 RNPAFREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQVCTNRA 297
           R+ A + ++   +L +  +G     V+ AR   TL  L+  GV LL+AL  ARQ   N  
Sbjct: 240 RDAAHKLKWHGLILRMPMVGRFALGVDTARFASTLSILMDAGVPLLRALEAARQTLVNEW 299

Query: 298 LQAQVGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADIFDVEA 357
           L+  V  A   VK G  LA+A  +Q + P   + ++  GE+ G L +M  + A     + 
Sbjct: 300 LKRCVLEATGRVKEGTPLAAALKAQKIFPSNLVHLVASGEKTGALAAMFERAALNLSRDL 359

Query: 358 KRGIDRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSLTSNI 398
           +R   RL   L P + + M  +V  I+LA+++P+M +   +
Sbjct: 360 ERRAMRLTTLLEPLMILAMGGVVMAIVLAVLMPIMEINQMV 400