Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 405 a.a., General secretion pathway protein F from Sphingobium sp. HT1-2

 Score =  216 bits (551), Expect = 7e-61
 Identities = 134/404 (33%), Positives = 225/404 (55%), Gaps = 11/404 (2%)

Query: 1   MSLFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQIEAAGSPLLRNPRG----- 55
           M+ F + A+D  G  + G+++A     A   L  R L ++++E     + R   G     
Sbjct: 1   MADFDYVAIDPAGKERKGSVKADSLDEARVKLDARKLFVVRLEPGAVSVARKRAGLSLRA 60

Query: 56  -QLKGAALVSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPLSA 114
            +L    L  FT+QL+TL+    PLE SL  + +Q  Q  VR ++G++   V  G+ L+ 
Sbjct: 61  PKLSAKELTLFTRQLSTLIQVS-PLEESLRTISRQSEQDHVRVIVGKVHSGVLEGRRLAD 119

Query: 115 ALEEEGGSFSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLVVG 174
           AL  E  SF  LY +M+ AGE+ G+L   + +LS+ +ER   +R +V+ A+ YP+ L   
Sbjct: 120 ALGAEPKSFPALYRAMISAGESSGSLPTIMERLSELMERQAVMRSKVLTAIAYPSVLATF 179

Query: 175 VLGSLALLLAYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYG--LLVLAGLIVSGGC 232
            +  +A L+ +VVP+ V  F  +G  +P +T +++ +  FL  Y   LL+L GL  + G 
Sbjct: 180 AVFVVAALMIFVVPKVVEQFDTVGQQLPLLTRLVMGISAFLAGYWWLLLILIGL-GAFGF 238

Query: 233 WAARLRNPAFREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQV 292
           W A L+  +FR ++D  LLG+  +G L++ + AAR+ RTL T++++ + L++ L +    
Sbjct: 239 WRA-LKIDSFRYRFDAMLLGLPVLGRLIRDLHAARMARTLSTMVASRLPLMEGLSLTANT 297

Query: 293 CTNRALQAQVGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADI 352
             NR L+       E+++GGG+L++A     + P L + +   GE AG LD+ML + AD 
Sbjct: 298 VHNRVLRKASDEIVEAIRGGGSLSAALKRAGVFPPLLVYLAASGESAGRLDTMLERAADY 357

Query: 353 FDVEAKRGIDRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSLTS 396
            + E        LA L P + ++M  +VAVI+L+I+LP++ L S
Sbjct: 358 LEREFDAFTSAALAMLEPIIIILMGGIVAVIILSILLPILQLQS 401