Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 403 a.a., Type II secretion pathway protein XcpS from Pseudomonas putida KT2440

 Score =  179 bits (454), Expect = 1e-49
 Identities = 119/396 (30%), Positives = 207/396 (52%), Gaps = 4/396 (1%)

Query: 4   FKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQIEAAGSPLLRNPRGQLKGAALV 63
           +  +AL  QGV Q   ++A D   A      +GL +L + ++G  L      +     LV
Sbjct: 10  YSLKALGRQGVVQL-QIDAEDADQARRQAEDQGLRVLSLRSSGGALRGMAWRREAAFDLV 68

Query: 64  SFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPLSAALEEEGGSF 123
            F+Q+L+TLL AG PL  +L  L ++      R ++  +   +  G+ LS AL ++   F
Sbjct: 69  LFSQELSTLLNAGLPLIDALESLAEKSPAATARKVLAELVRQLYEGRSLSQALGQQPRVF 128

Query: 124 SPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLVVGVLGSLALLL 183
            PLY+++V++ E  GAL + L +   Y +R + +R +++ A +YP  L++   G +  LL
Sbjct: 129 PPLYVALVQSSERTGALGDALTRYISYRQRLDLVRQKLVGASVYPLLLLLVGGGVVLFLL 188

Query: 184 AYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYGLLVLAGLIVS-GGCWAARLRNPAF 242
            YVVP+F  +F+ +G  +PW++ V++ +G FL A    +  G +      W  R R+P  
Sbjct: 189 GYVVPRFSQVFEGMGTELPWLSRVLMQVGLFLHAQQAPLALGTVGGVAALWLLR-RHPRV 247

Query: 243 REQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQVCTNRALQAQV 302
           R     +L  +  +   L   E AR  R+LG LL  G+ +L A+ +AR +  N A Q  +
Sbjct: 248 RYWASCQLRRLPALHQRLMMYELARFYRSLGILLQGGIPILTAMGMARGLLGNAAAQG-L 306

Query: 303 GSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADIFDVEAKRGID 362
             A++ V  G  L+ A  +  L+  ++L+++  GEQ+G L  ML + AD  D E  R ++
Sbjct: 307 EQASQRVGEGLPLSDALAAGHLVTPVSLRLLRAGEQSGNLGEMLERCADFHDQEIGRWVE 366

Query: 363 RLLAALVPSLTVVMAVLVAVIMLAIMLPLMSLTSNI 398
             +    P L   + +L+ +I++ + +P+  L S+I
Sbjct: 367 WFVKLFEPLLMTFIGLLIGLIVILMYMPIFELASSI 402